Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3616 ATGGATTCTGGAGGCAAAATTTGTGCACTTCTCATGGATATGATGGCACTCCCCTTTGTTGCTCTTCCACGAGAAACAGCATTTAATCTTGAGGAGAACAGGAACCTTTGCTTAGAGTGTCTAGACACAGCTATCATGGATACCAACCAAGCCCAACACCTTTACATTGACATTCAGAGATTTTACCAAGGTCATAATATGAATTTGGACCAGCAAATTCCTCTGAGGATGGTTGAAACACAAGTGATGCGTGAAACATCTGAAGAATATAGAAGTTATCCGGATAGGAAAGTGAAGAAAATATTGGTTTTATTTGGTTTACCAAGGTTGTATACTGGAATGATCATAGCTCATGAGATGATGCATGCATGGCTAATACTAAAAGGTTACTCGACCACTCTAGATCCAGTGGTCGAAGAAGGTATGTGTGAGGTTATGGCTTATATGTGGTTGGAGGCTGAGCTCTCTTCTCTATCCAGCAGCAACGTTATGTCACCTTATAATAAAAGGAAGCTTGGGGAGTTCTTGAAGTACCAATATGAATCAAACACGTCCCCTATTCACGGAGATGGATTTAGACAAGGTCAACAAGCAGTGAGCAAATATGGTCTAAAAAGAACCCTTGAACATATTCGGGAGACACAGAATTTTCCATCTTGA 660 0.4061 MDSGGKICALLMDMMALPFVALPRETAFNLEENRNLCLECLDTAIMDTNQAQHLYIDIQRFYQGHNMNLDQQIPLRMVETQVMRETSEEYRSYPDRKVKKILVLFGLPRLYTGMIIAHEMMHAWLILKGYSTTLDPVVEEGMCEVMAYMWLEAELSSLSSSNVMSPYNKRKLGEFLKYQYESNTSPIHGDGFRQGQQAVSKYGLKRTLEHIRETQNFPS* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3616 219 PANTHER PROTEIN DA1-LIKE 24 88 - -
Lja1g3616 219 PANTHER PROTEIN DA1-LIKE 86 218 - -
Lja1g3616 219 Pfam Protein DA1 82 213 IPR022087 -
Lja1g3616 219 PANTHER PROTEIN DA1-RELATED 2 24 88 IPR045218 -
Lja1g3616 219 PANTHER PROTEIN DA1-RELATED 2 86 218 IPR045218 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3616 Lja-Chr1 44848662 44852312 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3616 - - gmx:100783253 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3616 1 44848662 44852312 Lja1g3616 1 44848662 44852312 ECH