Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3608 ATGCCCGCAGTTCACTCTTTCTCTAAACCGGCTGCTGAACCGCGAACCGGAATCGAAGAGGCCGCGAAACGCAAGAAGGAGAAGGAGAACCTGCAGAAAAATCCGCAACAACAACAACAACAACAACGTCTGAGAAAGCAGGTAGTGCAGGAAATCTCTGACTCCATTGTTGTACGATGTAACAACGTGTCTTTGGACAGTACGTGCTCCTCGGATTCATGTTCCAGTAAGTCCATGTCGGTCAAAAAAGTCAACTCAACAACAAAGACCTCAAATGCAAGTGCAACTAGTAGGAGGAGGAACGCGAGGTGCACTGGGTTTAAGCCGGCGAGGGTTGTGCCGGATGCAGCTGCAGTGTCTCCGCCTTCCAACGCCTCAGCACCGCCCAAGAAGTGTGATTGGATCACACCTAATTCCGACCCACTGTATAGTGCTTTCCATGATGAAGAATGGGGTGTTCCAGTCGTCCATGATGATAGAAAGCTATTTGAGCTTCTAGTCTTCTCACAAGCATTAGCAGAACACACTTGGCCATCAATTCTTAGCCACAGAGACATGTTCAGGAAGCTTTTTGAAAACTTTGCTCCATCGTCAATTGCTCAGTTTACTGAGAAGGAGTTGCTAACACCGAAAATAAACGGCAAGCCATTGTTATCAGAACCAAAGCTCCGCGCCATTGTCGAAAATGCTAAACAATTACTTAAGGTCCAGCAGGAGTTTGGTTCATTCAGCAATTATTGCTGGAGATTTGTTAGCCACAAACCAATAAGAAATGAATTTCGGTATGGACGACAAGTACCTGTGAAGACTCCAAAAGCAGAACTCATTAGCAAGGACATGATGCGGAGGGGTTTCCAATGTGTGGGACCAACGGTAGTTTATTCATTCATGCAAGTAGCAGGACTCGTAAATGATCACCTAGTAACATGTTTCAGGTTCCATGAATGCAGCAATGTGACTCTCAAAAACGAATTCAAAACAGAGGTTAAGGAGAAAAAGGTAGAAAATGAAACTGTGAATTTGACAAAGATTCAGTGA 1038 0.4499 MPAVHSFSKPAAEPRTGIEEAAKRKKEKENLQKNPQQQQQQQRLRKQVVQEISDSIVVRCNNVSLDSTCSSDSCSSKSMSVKKVNSTTKTSNASATSRRRNARCTGFKPARVVPDAAAVSPPSNASAPPKKCDWITPNSDPLYSAFHDEEWGVPVVHDDRKLFELLVFSQALAEHTWPSILSHRDMFRKLFENFAPSSIAQFTEKELLTPKINGKPLLSEPKLRAIVENAKQLLKVQQEFGSFSNYCWRFVSHKPIRNEFRYGRQVPVKTPKAELISKDMMRRGFQCVGPTVVYSFMQVAGLVNDHLVTCFRFHECSNVTLKNEFKTEVKEKKVENETVNLTKIQ* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3608 345 Pfam Methyladenine glycosylase 138 312 IPR005019 GO:0006284|GO:0008725
Lja1g3608 345 Gene3D Hypothetical protein; domain 2 130 313 - -
Lja1g3608 345 SUPERFAMILY DNA-glycosylase 130 316 IPR011257 GO:0003824|GO:0006281
Lja1g3608 345 MobiDBLite consensus disorder prediction 16 32 - -
Lja1g3608 345 MobiDBLite consensus disorder prediction 33 47 - -
Lja1g3608 345 MobiDBLite consensus disorder prediction 1 47 - -
Lja1g3608 345 PANTHER OS04G0501200 PROTEIN 6 337 - -
Lja1g3608 345 MobiDBLite consensus disorder prediction 66 102 - -
Lja1g3608 345 PANTHER DNA GLYCOSYLASE SUPERFAMILY PROTEIN 6 337 - -
Lja1g3608 345 MobiDBLite consensus disorder prediction 66 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3608 Lja-Chr1 44786754 44789552 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3608 K01246 - gmx:100801163 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3608 1 44786754 44789552 Lja1g3608 1 44786754 44789552 ECH