Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3607 ATGGAGTCAGAACTCAAAGACCTCAATTCCAAACCACCCAAACCCAACGGCAACGCCACCGTCCGCGACGATCGTCCTCTACTCAAGTCCGATTCGGTGTCGTCGGTGTCCTCCACCTCCGAGAGCGTGGAGGAGCTGGAGAAGAAATTCGCCGCGTACGTGAGGCACGATGTGTACGGGACCATGGGGCGAGGGGAGTTGGCGACCAAGGAGAAGCTCTTGCTGGGTTTCGCATTGGTTACTCTGCTTCCAATCAGAGTCATTCTCGCTTTCACTGTGTTGTGCTGTTATTACTTGATTTGTAGGGTTTGCACCATGTTTTCAGCTCCTAATCGTGAGGATGAGCAGCAAGAAGATTACGCTCACTTGGGTGGGTGGAGGAGGGCTGTTATTGTTGCCTGTGGAAGAGCACTCTCTAGGGTTATGCTTTTCATTTTCGGCTTTTATTGGATCACCCATTCTCACACCACTATGGAGGAAGACAAACGTCAGCCTGAAGAGGCGAGGAGACCGGGCGTAATAATATCTAATCACGTCTCATACTTGGATATTTTGTATCATATGTCTAATTCGTTCCCAAGTTTTGTTGCCAAGAGATCAGTGGCTAAACTTCCTCTCGTTGGTCTCATCAGCAAGTGCCTTGGCTGTGTCTATGTTCAGCGGGAATCAAAGTCATCGGACTTCAAGGGTGTTTCAGCTGTTGTCACTGAAAGAATTCGAGAAGCTTATCAAAATAAATCTGCTCCGCTAATGATGTTATTTCCAGAAGGTACAACCACAAATGGAGATTACCTCCTTCCATTCAAGACTGGTGGTTTTTTGGCAAAGGCGCCAGTACTTCCTGTAATTATAAAATACCCTTACCAAAGATTTAGCCCTGCCTGGGATTCCATATCTGGGGTACGCCATGTGATATTTCTCTTATGCCAGTTTGTAAATAATATCGAGGTGATACGATTACCTGTATACTATCCCTCGCAGCAGGAAATGGATGATCCCAAAATATATGCCGATAATGTAAGAAGGTTGATGGCTACTGAGGGTAATTTGACACTCTCCGATATTGGACTAGCGGAAAAACGAATATATCATGCTGCTCTCAATGGTAATAATAGCCTGCCTAGTGTTTTGCATCAGAAAGACGATTGA 1149 0.4595 MESELKDLNSKPPKPNGNATVRDDRPLLKSDSVSSVSSTSESVEELEKKFAAYVRHDVYGTMGRGELATKEKLLLGFALVTLLPIRVILAFTVLCCYYLICRVCTMFSAPNREDEQQEDYAHLGGWRRAVIVACGRALSRVMLFIFGFYWITHSHTTMEEDKRQPEEARRPGVIISNHVSYLDILYHMSNSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSAVVTERIREAYQNKSAPLMMLFPEGTTTNGDYLLPFKTGGFLAKAPVLPVIIKYPYQRFSPAWDSISGVRHVIFLLCQFVNNIEVIRLPVYYPSQQEMDDPKIYADNVRRLMATEGNLTLSDIGLAEKRIYHAALNGNNSLPSVLHQKDD* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3607 382 MobiDBLite consensus disorder prediction 1 40 - -
Lja1g3607 382 Pfam Acyltransferase 166 284 IPR002123 GO:0016746
Lja1g3607 382 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 138 299 - -
Lja1g3607 382 SMART plsc_2 172 287 IPR002123 GO:0016746
Lja1g3607 382 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 16 382 - -
Lja1g3607 382 CDD LPLAT_LPCAT1-like 140 361 IPR045252 GO:0008374
Lja1g3607 382 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 16 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3607 Lja-Chr1 44779915 44785583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3607 1 369 Acyl Lipid Metabolism Gene Families AT1G80950 63.706 9.94e-180 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3607 K13510 - gmx:100820536 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3607 1 44779915 44785583 Lja1g3607 1 44779915 44785583 ECH