Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3597 ATGTCTGATCAAGTGAATGGCTTCTTGCCTGAGCTAAATCTTCCAGACTTGTTGCAGCACAGTGATGCTGTGAGACAGGTTCATGCAACTATTGAGAAGGAATGGGATTTCCTTCAAAGGTCTGCTTGCCAAACGGCTGCAGGGAGGGCTCTGTGGAAGCATGTCATCCATGATCCCCTAGCTGCCTTGCTGGCAGGGGAGACTTACCTGAGAAACATCCATGAGAAGATGAGGAAAGACCTTCTCAACAATGCGCATGAGATTTCTGGAGTGATTCTTGCTGTGAGAACCCTCTGGTTTGATTCAAGGCTGGAAGAAGCTCTCAGTTCCCCCAATGGGAGAGCGGCACAGGTTGTTCTCCTTGGTGCAGGAATGGACACGAGAGCATATCGTTTGAGTTTCTTAAAGGACAGTGATGTCTTTGAGGTTGACTTTTCAGAAGTCTTGGAGGTGAAAACCACCATTTTGCAAGCCGCTGAGGAATCAACCTACCACCGGCAGCACATTATGTCGAAAGCCAAGTCCTTAACAAGAGTGGCAGCTGACATAAGAGAAAATGACTGGATGGAAAAGCTTGAGGTTGCAGGTTTCTTGCCACAGAAGAGCACGGTTTGGATTCTAGAAGGCATCCTCTACTACCTAACCCAATCCCAGGCCATGCAAGTGCTGGGATATTTAGCTAACAATTGTGTCCTAACCCACACAGTCCTTATAGCAGACTTCATGAATAAGCCATCAACCACGCTGTCGAACTCTGCATTCCAATTTTACAGTGATTGGCCAGATCATCTATTACCATCAATGGGTTTTCCTCATGTAAAACTCTCACAAATTGGAGACCCAGATGCTCATTTTGGCCTCTTGAATGATCCATTGAATCTCTTTGACAAACTCCGTGGCTTGCCAAGGTCACTGCACACCAATCCAGACGATGGAACACCATGCTGTCGGTTGTACTTGGTGGAGGCTTCTGGTTCACCCGATCAGAGAGATGGGCATAAAGGGTCAATCACTCCGTCCTGA 1023 0.4731 MSDQVNGFLPELNLPDLLQHSDAVRQVHATIEKEWDFLQRSACQTAAGRALWKHVIHDPLAALLAGETYLRNIHEKMRKDLLNNAHEISGVILAVRTLWFDSRLEEALSSPNGRAAQVVLLGAGMDTRAYRLSFLKDSDVFEVDFSEVLEVKTTILQAAEESTYHRQHIMSKAKSLTRVAADIRENDWMEKLEVAGFLPQKSTVWILEGILYYLTQSQAMQVLGYLANNCVLTHTVLIADFMNKPSTTLSNSAFQFYSDWPDHLLPSMGFPHVKLSQIGDPDAHFGLLNDPLNLFDKLRGLPRSLHTNPDDGTPCCRLYLVEASGSPDQRDGHKGSITPS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3597 340 Gene3D Vaccinia Virus protein VP39 32 279 IPR029063 -
Lja1g3597 340 TIGRFAM mthyl_TIGR00027: methyltransferase, TIGR00027 family 52 232 IPR011610 GO:0008168
Lja1g3597 340 PANTHER LEUCINE CARBOXYL METHYLTRANSFERASE 18 307 - -
Lja1g3597 340 Pfam Leucine carboxyl methyltransferase 42 224 IPR007213 GO:0008168|GO:0032259
Lja1g3597 340 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE YKTD-RELATED 18 307 - -
Lja1g3597 340 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 39 321 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3597 - - pvu:PHAVU_009G057800g 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3597 1 44694540 44696959 Lja1g3597 1 44694540 44696959 ECH