Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3595 ATGCGAATTCCGAAGAGGCCTCTCTCATTCCCTCTCTCTCATTTCTCTCCTCACCTCTCTCCTTCTCGTTTGTCTTTCCGCCGTTCGTTCTCCTCCCCAATCTGCTCCAAACCTCCTCGATTTCTCGCTCACGCTACTTCTCCAGGAGCTAATCAGTTGCGCGCTCAAATGGATGGAAACCATGGAATTGGGGTTCATGACCCGAGATCAGTGGATTTGCCTGGCAGTCATAGTCGCGAACGGCCACGTGTATGGTCATCATCTCCTGAACATGGGTGTAAAGCTGATATAGGCAAACAGATATTTTGTAACCGGTCATTGAATATGAAGAACATCGTTGCTGTCGGATTTGACATGGATTATACTCTGGCACAATACATGCCCGAAACTTTTGAATCTCTTGCTTATCAAGGCACAATTAAAAAGCTGGTTCATGATTTGGGATACCCTTCTGAGTTACTGAATTGGTCCTTTAACCCGAAGTACATGGTTAGGGGTCTGGTTCTCGACAAAAAAAGAGGCAACATCTTGAAGATGGATCGTCACAAGTATGTGAAAGTCGCCTATCATGGATTTAAAGAGTTGTCAAAAGAAGATAAAGTTGGAACCTATGGAAATACTTTACTACGTGATTCTTTTGATGAGCCAGACTATGCTCTGATTGATACACTCTTTTCACTTGCGGAAGCCTACTTGTTTGCTCAACTGGTAGATTTTAAGGATGGCAATCCTGGAAAGATTCCAGAGGGTGTTGATTATGCTCGCATGTACAAGGATGTTCGAGCTGCGGTTGATTTGTGCCACCGAGATGGAACATTGAAGCAAATGGTTGTTAAAGATCCTAAAAGGTATATTAATGAAGACCTCTCGATAGTTCCCATGCTTGAAATGCTCAGAGAATCTGGACGTGCCACATTTTTAGTGACAAATAGTTTATGGGACTACACAAACATTGTCATGAATTACCTCTGTGGATACAGTGCGGTAGATGGCAGTAACAATTTTAACTGGCTTCAATACTTTGATGTTGTTATCACTGGCAGTGCAAAGCCAGGATTTTTTCACGAGGAAAATCGTGCCAACCTATTTGAGGTTGTTCCTGAGACTGGAATGCTACTCAATACAGATAATGGCTCTCCTATGGCTCAGGTGGGTAACATCTCAGCGAGGTCATTCGTAGAAGCCAAGAATCATGCTTGTCAAGTTTTCCAGGGAGGCAGTGTTGGTCATCTGCATAAACTGCTATCCATCGAATCGAGTTCACAGGTTCTGTATGTTGGAGATCACATTTATGGAGATATACTACGCAGCAAAAAGGTTCTTGGATGGAGAACAATGCTTGTAATCCCAGAGCTTGAGAAGGAGGTTGAACTCCTCTGGGAAACCAGGGATACCCGTAAGGAACTTCAATTCTTGAGGAGTGAGCGTGATCGGATTGAGGATGAAATACATCATATGAAGTGGTCTCTCAATGTGCCGTTTTTCAGATTCAAGAATCCAGACGCTGATGCCAAGCAGAAGTTATCTTCAGAACTTGATAAATTGGAGCTTGAAAGAGAGAGAGTACGATTAAGTCACCAAGATGCACAAAGAAAACTACATCAGAAGTTTCACGAGCCATGGGGGCAGCTTATGAAAACTGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCTTGCCTTTATACCAGCCAAGTATCTAACCTGGCCTTGTACTCTCCAGACAAATATTACAGACCCAGTGAAGATTTTATGCAGCATGAATTTGGCATTCTGGCTTTTGAGCCAGAGAAAATGGAAGTTTAG 1815 0.4309 MRIPKRPLSFPLSHFSPHLSPSRLSFRRSFSSPICSKPPRFLAHATSPGANQLRAQMDGNHGIGVHDPRSVDLPGSHSRERPRVWSSSPEHGCKADIGKQIFCNRSLNMKNIVAVGFDMDYTLAQYMPETFESLAYQGTIKKLVHDLGYPSELLNWSFNPKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFKELSKEDKVGTYGNTLLRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDGNPGKIPEGVDYARMYKDVRAAVDLCHRDGTLKQMVVKDPKRYINEDLSIVPMLEMLRESGRATFLVTNSLWDYTNIVMNYLCGYSAVDGSNNFNWLQYFDVVITGSAKPGFFHEENRANLFEVVPETGMLLNTDNGSPMAQVGNISARSFVEAKNHACQVFQGGSVGHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEKEVELLWETRDTRKELQFLRSERDRIEDEIHHMKWSLNVPFFRFKNPDADAKQKLSSELDKLELERERVRLSHQDAQRKLHQKFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLALYSPDKYYRPSEDFMQHEFGILAFEPEKMEV* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3595 604 MobiDBLite consensus disorder prediction 62 89 - -
Lja1g3595 604 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 43 595 IPR008380 -
Lja1g3595 604 Coils Coil 462 482 - -
Lja1g3595 604 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 101 469 IPR008380 -
Lja1g3595 604 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 43 595 - -
Lja1g3595 604 Gene3D - 261 478 IPR023214 -
Lja1g3595 604 Gene3D - 97 147 IPR023214 -
Lja1g3595 604 Pfam 5' nucleotidase family 101 592 IPR008380 -
Lja1g3595 604 Coils Coil 505 532 - -
Lja1g3595 604 MobiDBLite consensus disorder prediction 72 87 - -
Lja1g3595 604 PIRSF NT5C2 76 602 IPR016695 -
Lja1g3595 604 CDD HAD_cN-II 102 473 - -
Lja1g3595 604 SUPERFAMILY HAD-like 99 593 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3595 Lja-Chr1 44672801 44679932 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3595 - - vun:114164304 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3595 1 44672801 44679932 Lja1g3595 1 44672801 44679932 ECH