Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3589 ATGCAAGGAATTTACCGGATACTGCGACCTCACTATTATCCTCCAAGGGCTGCAATATTTCAACAATACCATGGGAATGGAATCATTAACCCGAACAAGCTATCTGCAGGTTTTGGATGTGTCACAACCTCTCCACCAATGCAGCAGAAAGGATTGGAGAATGTCACAGTATCTGACGTGCTGATGACAAAAGGGGAAGACAAAAATGGTTCCTGGCTTTGGTGCAGAGTTGATGATGCTGTAATCAATGCAATGAAGAATATGGCAGAAAATAATATTGGATCATTGGTGGTGCTAAATCCAGAAGGTCAGCATATAGCAGGCATTGTCACAGAACGAGATTGCTTGAAGAAAATAATTGCACAAGGAAGGTCTCCTTTATACACACAAGTTGGTCAAATCATGACTGATGAGAACAATCTGATAACAGTGACATCTGAAACCAACATTCTTCAAGCAATGAGACTTATGATAGAGAATCACATCCGGCATGTTCCGGTTATTGATGGGAAAATAGTTGGTATGATTTCCATTGTAGATGTTGTAAGAGCAGTGATGGAGCAACAAGGTGGAGAACTGAAGCGACTCAATGACTACATCAAAGGAGATTACTATTAA 618 0.4061 MQGIYRILRPHYYPPRAAIFQQYHGNGIINPNKLSAGFGCVTTSPPMQQKGLENVTVSDVLMTKGEDKNGSWLWCRVDDAVINAMKNMAENNIGSLVVLNPEGQHIAGIVTERDCLKKIIAQGRSPLYTQVGQIMTDENNLITVTSETNILQAMRLMIENHIRHVPVIDGKIVGMISIVDVVRAVMEQQGGELKRLNDYIKGDYY* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3589 205 ProSiteProfiles CBS domain profile. 62 127 IPR000644 -
Lja1g3589 205 Gene3D - 50 204 IPR046342 -
Lja1g3589 205 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL 1 204 - -
Lja1g3589 205 SMART cbs_1 140 186 IPR000644 -
Lja1g3589 205 SMART cbs_1 71 120 IPR000644 -
Lja1g3589 205 Pfam CBS domain 131 186 IPR000644 -
Lja1g3589 205 Pfam CBS domain 73 119 IPR000644 -
Lja1g3589 205 PANTHER CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN 1 204 - -
Lja1g3589 205 CDD CBS_pair_bac_euk 75 183 IPR044725 -
Lja1g3589 205 ProSiteProfiles CBS domain profile. 135 193 IPR000644 -
Lja1g3589 205 SUPERFAMILY CBS-domain pair 52 191 IPR046342 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3589 - - gmx:100778020 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3589 1 44635622 44636758 Lja1g3589 1 44635622 44636758 ECH