Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3574 ATGCATAGAAGCAAAAAAGCCAGAGAAAGAGTGGAGCAAATACAATACAATAATGAGAATGGAAGTTACACAGGTTCTACACACATGAATGGAGGAGTTGGAGAAGCAAGCTATGCAAACCTCTTTAGTGATTCTTTAACAAAGCCTATAAGAGAAGAAGCCATAACCAGCCTTTATTGCACCACATTCCCAAGAAGCCTTGCAATTGCAGACATGGGTTGTTCTTCAGGACCAAACACTCTGTTTGTGGTTTCAGAAATTATCAAGGTTGTGGAAAAGCTTTGCCGAGAGCTGAACCGTAAATCTCCAGAGTACAAGGTGTTTTTGAATGACCTTCCTGGAAATGATTTCAACAACATCTTTAAGTCCCTTGACAGCTTCAAAGAGAAACTAAGTGATGAAATGGAATCGGACATAATGGGTCCATGCTACTTCTATGGGGTTCCTGGTTCTTTCTATGGCAGAGTTTTTCCTAATCAAAGTCTAAATTTTGTCCATTCTTCTTACAGCCTCCAATGGCTATCTAAGGTTCCTGAAGGAGCAGAGAACAATAAAGACAATATATACATATCGAGAACAAGCCCCTCAAATGTTGTAAAGGCTTACTACGAGCAGTTTCAAAGAGATTTCTCTGTTTTTCTCAAGTGTCGTGCAGAGGAACTAGTTGAAGGGGGTCGCATGGTTCTAACATTTTTGGGAAGAAAGAGTGACAATCCATGTAGCAAGGAGTGTTGCTACATTTGGGAACTTATGGCTAAAGCTCTCAATGATATGGTCATGCAGGGGATTATAAAGGAAGACCAAGTGACTACTTTCAACATCCCTCAATATACTCCATCTCCATTAGAAGTGAAATGGGAAGTTCTTAAAGAAGGATCATTCGCCATTAATCGCTTGGAGGTGTCAGAAGTGAATTGGAACGCTATGGATGAATGCAATGTTTTTGAATTTGAGTCTGAAATGAATGAATCACTGAGTGATAGTGGATACAATGTTGCTCAGTGCATGAGGGCAGTGGCTGAACCTTTGCTGGTTAATCACTTTGGTGAAGCTATCATTGAAAAGGTTTTTAGTCGCTACCAAGAAATCTTGGCTGATAGGATGTCTAAGGAGAAAACTAAATTTGTCAATGTTACCATATTGTTGACTAGGAAAGGATGA 1161 0.3979 MHRSKKARERVEQIQYNNENGSYTGSTHMNGGVGEASYANLFSDSLTKPIREEAITSLYCTTFPRSLAIADMGCSSGPNTLFVVSEIIKVVEKLCRELNRKSPEYKVFLNDLPGNDFNNIFKSLDSFKEKLSDEMESDIMGPCYFYGVPGSFYGRVFPNQSLNFVHSSYSLQWLSKVPEGAENNKDNIYISRTSPSNVVKAYYEQFQRDFSVFLKCRAEELVEGGRMVLTFLGRKSDNPCSKECCYIWELMAKALNDMVMQGIIKEDQVTTFNIPQYTPSPLEVKWEVLKEGSFAINRLEVSEVNWNAMDECNVFEFESEMNESLSDSGYNVAQCMRAVAEPLLVNHFGEAIIEKVFSRYQEILADRMSKEKTKFVNVTILLTRKG* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3574 386 Gene3D Vaccinia Virus protein VP39 41 373 IPR029063 -
Lja1g3574 386 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 27 384 - -
Lja1g3574 386 Gene3D - 28 371 IPR042086 -
Lja1g3574 386 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 27 384 IPR005299 GO:0008168
Lja1g3574 386 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 385 IPR029063 -
Lja1g3574 386 Pfam SAM dependent carboxyl methyltransferase 53 384 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3574 Lja-Chr1 44465651 44469731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3574 K21483 - gmx:100170650 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3574 1 44465651 44469731 Lja1g3574 1 44465651 44469731 ECH