Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3568 ATGGGTTCTCTGAAAGGACCAGTTGTTTGCCTTGCTAAAGTAGCAGGGTCTTGCAGTGTTTCTATGCCTATGATTGGATCAATGAACTCTAGAACTGAATTTTGGGGACTCACTGGTGGTGGTAGCAAAGGTAAAGCCAGTGGTGCCCTTTCTTCTCATGTGAACATGAGAAGGTGCATGACTGTGCATTGCAGCTTCAACTCTTCCTCAAATGGGAGTGGAAGTATGGCAGAAAATTTTAATCAGAATGATGAAGATTATGTTAACTCCAGTATTGTTGAAGCTGTTGAGGTGAAGAGTGGAGCAGATGGTTTTCTGATCAAGATGAGGGATGGTAGACATGTGAGATGCATCCACAACAACCCTCAAGGAGGGCTGCTTCCTGATTATGCACCCCATCCTGCTATTGTGTTGAAGATGGAGGATGGGACTGGTCTACTTCTACCCATCATTGTTTTGGAGATGCCAAGTGTCTTATTAATGGCAGCAGTACGCAATGTTCAAATAGCAAGACCTACTTTATATCAAGTAGTGAAGGAGATGATTGACAAGATGGGTTACCAAGTCAGAGCTGTTAGAGTTACTAAGAGAGTTCATGAGGCATATTTTGCTCAGATATATCTTTCTAAGGTTGGAAATGAGGAAGAATGTGTGAGCTTTGACCTTCGACCTTCAGATGCTATCAACATTGCTGTTAGATGCAAGGTGCCAATACAAGTCAACAAGTATTTGGCATACAGTGATGGAATGAGAGTAATTGAGTCAGGCAAACTTTCAACACAGTCTCCTGGTTCAGACGGCCCATTATTCACTGAACTGGACCGACCAAGCAATAAGCCTTGTACTGAAACCAAGGAGTTCAATCTTTTGGAGAACATGATGAAAGCTGTTGGAGAAGAACGCTATCAAGATGCTGCTCTTTGGAGGGACAAACTTAATCAACTTAGGGCTGGAAAGAAGGCGAATAACAGATCCTGGACACTATGA 987 0.4286 MGSLKGPVVCLAKVAGSCSVSMPMIGSMNSRTEFWGLTGGGSKGKASGALSSHVNMRRCMTVHCSFNSSSNGSGSMAENFNQNDEDYVNSSIVEAVEVKSGADGFLIKMRDGRHVRCIHNNPQGGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTLYQVVKEMIDKMGYQVRAVRVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTQSPGSDGPLFTELDRPSNKPCTETKEFNLLENMMKAVGEERYQDAALWRDKLNQLRAGKKANNRSWTL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3568 328 PANTHER NUCLEASE IN BASAL DEFENSE RESPONSE PROTEIN 1 321 - -
Lja1g3568 328 Pfam Bifunctional nuclease domain 136 246 IPR003729 GO:0004518
Lja1g3568 328 SUPERFAMILY Hypothetical protein TM0160 117 255 IPR036104 GO:0004518
Lja1g3568 328 MobiDBLite consensus disorder prediction 257 277 - -
Lja1g3568 328 Gene3D Bifunctional nuclease domain 123 257 IPR036104 GO:0004518
Lja1g3568 328 PANTHER VON HIPPEL-LINDAU PROTEIN 1 321 - -
Lja1g3568 328 ProSiteProfiles Bifunctional nuclease (BFN) domain profile. 117 252 IPR003729 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3568 Lja-Chr1 44412188 44415684 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3568 - - gmx:100807950 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3568 1 44412188 44415684 Lja1g3568 1 44412188 44415684 ECH