Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3553 ATGGCATTAACACTACCACAGCTTATCCCTTCACCTCCATCATCTTCCACTCTATCTCACAAACCCTGCCAAAACCCCACCAGACTCTCCATAAACCCTAACTTCCCATCCTCCTCAACAACTCATGTCCTCCACCACCACCGCCGCCGCCGCGGCGGCAACCTCACGTGCTCGGCTTCGTCTTTCTCGGAGAAGCATCACACCGACTCCCCGAGGTCCGACGACGTGGTGGAGCTTCCTCTGTTTCCACTCCCTTTGGTGCTCTTCCCCGGCGCCATCCTCCCTCTCCAGATCTTCGAGTTCCGCTACCGCATCATGATGCACACACTCCTCCACACCGATCTCCGCTTCGGCGTCATCTACACCGACGCCGTCACCGGCACCGCCGAGGTCGGCTGCGTCGGCGAGGTCATCAAGCACGAGCGTCTCGTCGATGACCGATTCTTCCTGATCTGTAAAGGCCAGGAACGTTTCCGCGTGACGAAGCTCGTCCGGACCAAACCCTACCTGGTCGCTCAGGTCACATGGCTCGAGGATAGACCTTCACCCGACGCGGACCTTGACCTGGATGGGTTAGCGAGCGAGGTGGAGACGTATATGAAGGATGTGATTCGGTTATCGAATCGGTTGGGTGGGAAACCAGAGAAGGAGGTTGGGGATTTGAGGAGGAACTTGTTCCCGACGCCATTTTCGTTCTTCGTTGGAAGCACGTTTGAAGGCGCGCCGAGAGAGCAACAGGCTCTGCTTGAATTGGAGGATACTGCAGCGAGATTGGTGAGGGAGAAGGAGACATTGAAGAACACGCTTAACTATCTCTCTGCTGCTTCTGCTGTGAATGATGTTTTCCCTTCTTCTTCTTCATCTTCTTCCTCTTCCTCTTCTTCTCCGTCTTGA 894 0.5548 MALTLPQLIPSPPSSSTLSHKPCQNPTRLSINPNFPSSSTTHVLHHHRRRRGGNLTCSASSFSEKHHTDSPRSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGVIYTDAVTGTAEVGCVGEVIKHERLVDDRFFLICKGQERFRVTKLVRTKPYLVAQVTWLEDRPSPDADLDLDGLASEVETYMKDVIRLSNRLGGKPEKEVGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAARLVREKETLKNTLNYLSAASAVNDVFPSSSSSSSSSSSSPS* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3553 297 Coils Coil 248 268 - -
Lja1g3553 297 Gene3D - 76 179 IPR046336 -
Lja1g3553 297 MobiDBLite consensus disorder prediction 8 41 - -
Lja1g3553 297 ProSiteProfiles Lon N-terminal domain profile. 79 267 IPR003111 -
Lja1g3553 297 Pfam ATP-dependent protease La (LON) substrate-binding domain 78 266 IPR003111 -
Lja1g3553 297 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 4 285 - -
Lja1g3553 297 SUPERFAMILY PUA domain-like 78 266 IPR015947 -
Lja1g3553 297 SMART lon_5 78 267 IPR003111 -
Lja1g3553 297 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 4 285 - -
Lja1g3553 297 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3553 Lja-Chr1 44243611 44245244 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3553 - - gmx:100807718 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3553 1 44243611 44245244 Lja1g3553 1 44243611 44245244 ECH