Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3530 ATGGATGGTGAAGACGTGAGTTCTGGGGCAAAGAAGAGGTCTAAACTGGTTGAAACTGATGATAATGAGCTCATTGGGTCTATGTTTAAGGCGAGGAAGCCGCGGGATGTGAAAAAGAAGGTTAGCTTGGCAACCGAGGGCACTGGTGGTGGTGAAGGCGAGAATGCTGGCAGTCGTGGGGGGCTACGAGAGGGTTTAGGGGGTTTGGATGATACTCTGGCTAACTTTAGAAAGAGGTTGAAGGGTCCTAAGAAAGAGCAGGGATCTGGAGCTGCAAGAGGGAAGAAAGCTTTTGCCTTGAATGAGGATTTGGATGAAAAGTCTTCGCTGAATGAGGACAATGTCTGCGTGGGGCTTGCTGTGGGGGATGGTGGATCTGATTTAGCTATGGATATGAAGATCATGGGTAGCTGTGAAGTGAAATTAGAGGGACCTAATATGGATTTGACATTGAAGGGAACTGAGGGTCATGCCTTGTCTGTTGGTGATTTGGTTGCGAAAGGGTCTAGGAGCACCGCAGAAGATGAGAAAGGGGTGGGTGTGATCCAGAAAAGTGAGAGCCAGAATGTGAATGATGGGTTGAGCATGTGCTGCAAAAGTTCCCCTGAAATCGCCAAGGGCGTATGTCATCCAACCATTCCTGATGAGCCGTTAGTTGATCCCCGTTTCTCAACCAACGCCTGCTATGGAGGTAGCCAGCAATTGTCTTGTGTACAACCTGAAGATATATGTTCTCCTTCTGACCAAAAGGTGGCATTACAAGAAGGATCTTTCAATGATGGCTTAAAGAAGTGTTCTGCCATGTTGCATGATGTTGAAGGTAAAATCGACACAGTCTCGCTCAGAGAAGTAGGGGAAGGGGTGTGTCGGTTTAGTGAGGGTGAGCTTAAGGACACTTTGCCTGATGAGCAAGCACAAGTATGTAATAGTGCACCAAAACATGGCGATTTTACTTATATGGACAAAGCAAAGTTGTTCTCCTGTGACTCCGAGCTCTTGACTAAATCATCTGAGAATCTACTTAATGAAAATAATCATATGGTTTCTGGAAAAAATTTCCTGGGATCCTCAAGAAATGGAACTCTGAAGCTCTCTGGATGCCGAACAGAGGTAGATGAAGATGTAAATTCTGAAACTAAGTTTGTTTGTTGGAGAAATTGCTGTGATCGTAATAATCTAGATACCAAGGCCGAAACACATGGTTTTGTTGTAGGTTTCTTTCCTGAAATAAATTCTGTAAATTATGGTGGTAGTTTAGATCCTGTGGTGTCAAATGAAGCCAATGAATCTGAATTGGCTATTAAGTCAAATCACCCTGAGAAACCTTCAGAAACAAGTAATATTCCAAAGGACTCTAATTCCTCCATTCCAAAATGCACCTCGGTATTGGATCCGACTCAACCTTGTAACAATACATTTGAAGAGGGTTCCCTTCCAAATGATGATTGTTTCTATACCAAGAAAGATACTGATGGTGCCTCATCTCAGGGTGCAATTCCAGAGGAAAATGAGAATTGCGAAGAATATGCTGTCTCTGGTTCTGAGGTTGCCAATAAAGATAATAAGGCATCAGCATCTACGCGCCGGAAGGCTAAGAAGCGTAGGCATGGAGACATGGCGTATGAAGGGGATGGTGATTGGGAGGTTTTGATAAATGACCAAGCTTTTCTTGAAAGCCAAGGTGGTCTTGATGGTGAACACATTCACAGACCGAGAGTGAAGTTTGATTCCTCTTTGAATGATGCTGTTGATGAGTCTGACAGTGTCGCAGTAGCAGTATCAGCTGGGCTGAAAGCGCATGCAGCTGGTCCAGTTGAGAAAATAAGATTTAAGGAGATCTTAAAGCGTAAAGGTGGTCTCCAGGAATATTTGAATTGCAGAAATCAGATCTTAAGCCTTTGGAGCAGTGATGTCACGCGTATTTTGCCTCTTGCTGACTGTGGGGTTAGTGATACTCCTTCTGAGGATGAACCTCCTAAGTCTTCTTTGATTAGGAAGGTCTATGCATTTCTTGACCAATGTGGTTATATTAATGTTGGAATTGCCTCACGAAAGGAGAATGTTGGAAGTAGTGCGAGCCATAACTATAAGCTTATAAAAGAAAAAGGTTTCGAGGATAGTTCTGCAGCTTCTGTTGCTGACTCTGAAGATGGTGTGTCCTTTATTGTTGGTCAGAATAAAAAGTCAGATTGCTCCATAGAGAATAAGATTGGTCTTATAGTAGATCATGAAGACCTCACAACTGAAGCTACAGATGACAGGAGGCATGTTGATGTAGTGATGATGGATTTATCAAACATGACACAACATGAAGAAAGAAAGAGTGATTATTACCAGGAAAATGGTGGAATTGAGGATGGTTTAAGTGCAATTATACATGGAAATGTTAGCAGTTCTGAGCAAAGCAATGAATCTACACGTGTTAAGTCTGCCTTGGATGATCAGATAGGTAGTCTACTGCATCCTGATTCAGAGGCTACAAAGAGAGTAATTGTCATTGGAGCTGGTCCTTCTGGGCTAACTGCTGCTCGACACTTGCAACGTCTGGGATTTCCTGTAACTATACTCGAGGCAAGGAGTAGGATAGGAGGCCGAGTGTATACAGATCACTCATCTCTTTCTGTTCCTGTGGATCTTGGTGCTAGCATTATCACTGGTGTTGAGGCTGATGTGGCTACTGAGAGAAGACCAGATCCTTCCTCATTAGTTTGTGCTCAGTTGGGCCTTGAGTTGACAGTGCTGAACAGTGAATGTCCTCTTTATGACATAGGGACGGGACAAAAGGTTCCTGCAGATATGGATGAAGCACTGGAAGCTGAATTCAATAGTCTTCTTGATGACATGGTATTGCTTGTCGCCCAGAAGGGTGAACATGCCATGCGAATGTCTCTTGAAGATGGTCTAGAATATGCTCTTCAAAGGCGCCATTTGGAACGCTTTGGAAGAAATAATGATCAAATTGAACAAAATAATTCTGCAGACAGTCCATTTGATTCCAAAAGAGGCACTACCCTGCAAAGAAAATTGGAAGAGGAGATTTTGAGTCCTATGGAGAGGAGGGTTATGGATTGGCACTTTGCAAATTTGGAGTATGGATGTGCTGCTCCGCTTAAGGAAGTTTCTCTTCCCTACTGGAATCAAGATGACGTGTATGGAGGATTCGGAGGAGCTCATTGTATGATTAAAGGGGGTTACAGCTCTGTCGTTGAATCTTTAGGAGAAGGGCTTGTCATTCACTTGAACCATGTTGTAACAAATGTGTCTTACGGAAGCAAGGAAAATGGTCAAGGTGATAAGGTCAGAGTATCTACATCAAATGGCAATGATTTCTTTGGAGATGCTGTTCTGATTACTGTTCCATTAGGCTGTTTGAAGGCTGAAACTATAAAATTCTCTCCCCCTTTGCCGGCATGGAAACAGTCTTCTATTCAGCGCCTTGGATTTGGAGTTCTCAATAAAGTGGCATTGGAATTTCCTCACGTGTTTTGGGATGATGCTGTTGACTACTTTGGAGCAACAGCTGAGGAGGCGAGCAAAAGAGGCCACTGCTTTATGTTCTGGAATGTCAGGAAGACAGTCGGAGCTCCAGTCCTCATAGCATTAGTGGTTGGGAAGGCAGCCATAGATGGTCAGAATTTGAGTTCTTCTGATCATGTTAACCAAGCATTAATGGTTCTTCGGAAACTTTTTGGGGATGCTTTTGTACCCGATCCTGTTGCACATGTTGTGACTGATTGGGGCAGGGATCCTTTTAGTTATGGTGCTTACTCTTATGTTGCCATTGGAGCATCAGGAGAAGACTATGATATATTAAGGAGGCCAGTTGATAACTGCCTGTTTTTTGCTGGTGAAGCGACCTGCAAAGAGCATCCTGATACCGTTGGTGGTGCGATGATGAGTGGACTCCGGGAAGCTGTGCGCATAATTGACTTATTTAGCACCGGAAATGATTATACTGCTGAGGTGGAGGCAATGGAGGCTGCACAGGGACAGTCAGAAACTGAAAGAGATGAAGTTAGGGGTATAATAAAGAGACTTGATGCAGCAGAGTTTTCTAATGTATTGTACAAGAAGTCTGTGGATGGTGCTCGAATCTTGAGTCGGGAAGTTTTGCTTAGGGACTTGTTCTTCAATACAAAAACCAATGCTGGGCGCTTGCATGTAGCCAAACAATTGCTGACTCTTCCTGTTGAAACCTTAAAATCCTTTGCTGGGTGTAAAAAGGGGTTGACCATTCTCCACTCATGGATACTGGACTCAATGGGGAAGGATGGCACCCAACTCTTGCGGCACTGCGTTCGTCTTCTTGTGCGAGTTTCAACTGATTTACTTGCTGTGCGGTTATCAGGCATCGGGAAAACAGTGAAGGAAAAAGTCTGTGTACATACTAGCCGTGATATTCGTGCTATTGCAAGCCAGTTGGTTAGTGTATGGCTTAAAGTCTTCCGCAAGGAAAAAGTATCTAATGGAGGACTAAAGCTGTCAAGACAAGCAACTGCTGTAGATATATCAAAGAGAAAATTTACGAGAGATCCAGCATCAGGAAAGCCACCCCTGAGTACACATCATAGTACCTTTGAGAATAAAGGAGGCATGCTAACTCCTGCAAATAATTCACCTTCCATTGCACATGTGAAGAAATCACATGGCAAGCAAGGAAGACAGCAAGCGGCAGATGACTTGAAGCATGATGTCAGTTCTTCCATGTCCCAAGGTTCAACGGGTGCTGAGGTGAAGGACAACCACTGTGCTATGTCTGAAGAAGAACTGGCTGCTATAGCTGCTGCAGAAGCTGCTTGTGCAAAAGCACTTGCTGCTGCCGAGGCATATGCCTCAGCAGAAACTAGGTGCAGTACACTACTCCAGCTTCCGAAGATACCCTCTTTCCTCAAATTTGCTAGACAGGAACAATATTCCCAAAATGACGAGAGTGATATTAGGAAAAAGGGGCCTGGTGGTGTTTTGGGAAGGCAAGATTGTATTTCAGAGATTGATTCTAGAAACTGCAGAGTTAGAGATTGGTCTGTAGATTTCTCTTCTGCTTACGTTAACCTTGATAATTCCAGAATGTCAGTTGATAACCTCTCACAGCGGAGCCATTCAAATGAGATTGCCAGTCATTTGAATTCCAGAGAGCACTCGGGAGAAAGTGCTGCTGTGGACAGCAGTATATACACAAAAGCTTGGATTGACGCAGCTGAAGGTGTGGGAATGAAGGACTATCATGCCATTGAGAGATGGCAATCTCAGGCAGCTGCAGCACATTCTGATTCTTCTAATCCAACCATACATTTGAAGGATGAAGAGGATTCAAATGCCTGCTCTAGGCTACCCAGCTGGAAGCAGGATGGTATGGCAAATGAAAGCTCTATTTCACAGGTTACTGTGAATAAGGAGATTTCAAAATGTCATTCTCAAGGAGTAGAGCATATTAAACAGGCTGTTGTGGATTATGTTGCGTCTCTACTGATTCCCCTTTATAAGACGAGAAAACTAAATAAAGATGGATACAAGGCTATAATGAAGAAAAGTACAACCAAGGTCATGGAGCAAGTCACAGATGCAGAAAAAGCCATGGCTGTTCATGAGTTTCTGGATTTCAAGCGGAAGAATAAGATTCGCTCCTTTGTGGACAAATTGATTGAGAGACATATGGAAAAGAAATGTGATGTGAAATCTTAA 5682 0.4354 MDGEDVSSGAKKRSKLVETDDNELIGSMFKARKPRDVKKKVSLATEGTGGGEGENAGSRGGLREGLGGLDDTLANFRKRLKGPKKEQGSGAARGKKAFALNEDLDEKSSLNEDNVCVGLAVGDGGSDLAMDMKIMGSCEVKLEGPNMDLTLKGTEGHALSVGDLVAKGSRSTAEDEKGVGVIQKSESQNVNDGLSMCCKSSPEIAKGVCHPTIPDEPLVDPRFSTNACYGGSQQLSCVQPEDICSPSDQKVALQEGSFNDGLKKCSAMLHDVEGKIDTVSLREVGEGVCRFSEGELKDTLPDEQAQVCNSAPKHGDFTYMDKAKLFSCDSELLTKSSENLLNENNHMVSGKNFLGSSRNGTLKLSGCRTEVDEDVNSETKFVCWRNCCDRNNLDTKAETHGFVVGFFPEINSVNYGGSLDPVVSNEANESELAIKSNHPEKPSETSNIPKDSNSSIPKCTSVLDPTQPCNNTFEEGSLPNDDCFYTKKDTDGASSQGAIPEENENCEEYAVSGSEVANKDNKASASTRRKAKKRRHGDMAYEGDGDWEVLINDQAFLESQGGLDGEHIHRPRVKFDSSLNDAVDESDSVAVAVSAGLKAHAAGPVEKIRFKEILKRKGGLQEYLNCRNQILSLWSSDVTRILPLADCGVSDTPSEDEPPKSSLIRKVYAFLDQCGYINVGIASRKENVGSSASHNYKLIKEKGFEDSSAASVADSEDGVSFIVGQNKKSDCSIENKIGLIVDHEDLTTEATDDRRHVDVVMMDLSNMTQHEERKSDYYQENGGIEDGLSAIIHGNVSSSEQSNESTRVKSALDDQIGSLLHPDSEATKRVIVIGAGPSGLTAARHLQRLGFPVTILEARSRIGGRVYTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELTVLNSECPLYDIGTGQKVPADMDEALEAEFNSLLDDMVLLVAQKGEHAMRMSLEDGLEYALQRRHLERFGRNNDQIEQNNSADSPFDSKRGTTLQRKLEEEILSPMERRVMDWHFANLEYGCAAPLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSSVVESLGEGLVIHLNHVVTNVSYGSKENGQGDKVRVSTSNGNDFFGDAVLITVPLGCLKAETIKFSPPLPAWKQSSIQRLGFGVLNKVALEFPHVFWDDAVDYFGATAEEASKRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQNLSSSDHVNQALMVLRKLFGDAFVPDPVAHVVTDWGRDPFSYGAYSYVAIGASGEDYDILRRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDLFSTGNDYTAEVEAMEAAQGQSETERDEVRGIIKRLDAAEFSNVLYKKSVDGARILSREVLLRDLFFNTKTNAGRLHVAKQLLTLPVETLKSFAGCKKGLTILHSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLKVFRKEKVSNGGLKLSRQATAVDISKRKFTRDPASGKPPLSTHHSTFENKGGMLTPANNSPSIAHVKKSHGKQGRQQAADDLKHDVSSSMSQGSTGAEVKDNHCAMSEEELAAIAAAEAACAKALAAAEAYASAETRCSTLLQLPKIPSFLKFARQEQYSQNDESDIRKKGPGGVLGRQDCISEIDSRNCRVRDWSVDFSSAYVNLDNSRMSVDNLSQRSHSNEIASHLNSREHSGESAAVDSSIYTKAWIDAAEGVGMKDYHAIERWQSQAAAAHSDSSNPTIHLKDEEDSNACSRLPSWKQDGMANESSISQVTVNKEISKCHSQGVEHIKQAVVDYVASLLIPLYKTRKLNKDGYKAIMKKSTTKVMEQVTDAEKAMAVHEFLDFKRKNKIRSFVDKLIERHMEKKCDVKS* 1894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3530 1893 MobiDBLite consensus disorder prediction 981 1002 - -
Lja1g3530 1893 MobiDBLite consensus disorder prediction 1 67 - -
Lja1g3530 1893 MobiDBLite consensus disorder prediction 1505 1576 - -
Lja1g3530 1893 MobiDBLite consensus disorder prediction 512 539 - -
Lja1g3530 1893 MobiDBLite consensus disorder prediction 1 42 - -
Lja1g3530 1893 MobiDBLite consensus disorder prediction 1518 1545 - -
Lja1g3530 1893 Gene3D - 936 1264 - -
Lja1g3530 1893 MobiDBLite consensus disorder prediction 439 459 - -
Lja1g3530 1893 Gene3D - 830 1307 IPR036188 -
Lja1g3530 1893 ProSiteProfiles SWIRM domain profile. 588 688 IPR007526 GO:0005515
Lja1g3530 1893 MobiDBLite consensus disorder prediction 984 1000 - -
Lja1g3530 1893 MobiDBLite consensus disorder prediction 1562 1576 - -
Lja1g3530 1893 SUPERFAMILY Homeodomain-like 589 684 IPR009057 -
Lja1g3530 1893 Pfam Flavin containing amine oxidoreductase 838 1309 IPR002937 GO:0016491
Lja1g3530 1893 PRINTS Adrenodoxin reductase family signature 829 851 - -
Lja1g3530 1893 PRINTS Adrenodoxin reductase family signature 852 865 - -
Lja1g3530 1893 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 515 1888 - -
Lja1g3530 1893 SUPERFAMILY FAD-linked reductases, C-terminal domain 1147 1258 - -
Lja1g3530 1893 SUPERFAMILY FAD/NAD(P)-binding domain 827 1310 IPR036188 -
Lja1g3530 1893 MobiDBLite consensus disorder prediction 429 459 - -
Lja1g3530 1893 MobiDBLite consensus disorder prediction 1752 1788 - -
Lja1g3530 1893 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1406 1490 IPR035441 -
Lja1g3530 1893 PANTHER FLAVIN MONOAMINE OXIDASE 515 1888 - -
Lja1g3530 1893 Pfam SWIRM domain 602 678 IPR007526 GO:0005515
Lja1g3530 1893 Gene3D - 588 691 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3530 Lja-Chr1 43993893 44003818 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-SWI3 Lja1g3530 Amino_oxidase 1.1e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3530 - - mtr:MTR_3g113170 2549.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3530 1 43993893 44003818 Lja1g3530 1 43993893 44003818 ECH