Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3520 ATGTTGAAGTTCCTATCAAAAGTGAAGATCGAGTTCAGTGCGCTAGACCCACGAGCAGCATCATGTATGGAGTTTCTCGCACAATGCAACTCACGGAAGGCGAAGGAATCCAACCCCGCTTGCGAGGTGGAGGTCAAGCGCGGAAACGTCGCTCATCCGCCGCAGATCACCGTGACGTTCGTGAACGGCGTTGAAGAAGCCTTCGATGCAACAGCCACGCCCGCCCACAACATCAGAAGCATGATTCTTGAAAAGGGTCAGCTCCTTGAGACCGAACAGATGTTCCGTGAGGCAGGAGAGGCTTGGCCTGTTATCATCCCTGAGGAGGAGATTTCGCAACACGCTCCCGGTACCAAACCTAGGAAAGCAGAAGACAAGAAGCAATAA 387 0.5297 MLKFLSKVKIEFSALDPRAASCMEFLAQCNSRKAKESNPACEVEVKRGNVAHPPQITVTFVNGVEEAFDATATPAHNIRSMILEKGQLLETEQMFREAGEAWPVIIPEEEISQHAPGTKPRKAEDKKQ* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3520 128 MobiDBLite consensus disorder prediction 114 128 - -
Lja1g3520 128 Pfam 39S ribosomal protein L53/MRP-L53 12 63 IPR019716 -
Lja1g3520 128 PANTHER 39S RIBOSOMAL PROTEIN L53, MITOCHONDRIAL 1 128 - -
Lja1g3520 128 Gene3D Glutaredoxin 1 99 - -
Lja1g3520 128 MobiDBLite consensus disorder prediction 107 128 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3520 K17434 - jre:108981148 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3520 1 43886117 43888104 Lja1g3520 1 43886117 43888104 ECH