Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3510 ATGGAACTTCAACAACAACAACCCATCAAGTCTAGGTTCAGACGCATCTGTGTCTACTGCGGTAGCAGCCCTGGAAAGAGCCCCAGCTACCAACTCGCTGCTATTCAACTTGGGGAACAATTGGTGGAGAGGAACATTGACTTGGTTTATGGAGGAGGAAGCATTGGCTTGATGGGTCTAATCTCACAAGTTGTCTATGATGGTGGACGCCACGTGTTAGGAGTGATTCCCAAGACACTTATGCCAAGAGAGATCACTGGAGTGACTGTAGGAGAAGTAAGAGCTGTTTCAGGCATGCACCAACGCAAGGCTGAAATGGCTAGACAAGCAGATGCATTTATTGCCTTACCAGGTGGATATGGCACCCTTGAAGAACTGTTGGAAATCATCACCTGGGCTCAGCTAGGCATCCATGACAAACCGGTGGGGTTGTTGAACGTGGATGGGTACTACAACTCGTTGCTGGCATTCATAGACAAAGCAGTCGATGAAGGTTTTGTAACACCAGCTGCCCGTCACATAATTGTTTCTGCCCATACTGCCCAAGACCTCATGTGCAAGCTTGAGGAATATGTCCCCATGCACTCTGGTGCGGGACCAAAGCTAAGTTGGGAGGAGGAACAACAAATAGTCAACACTGCAATGTTTGATATTTCTCGTTGA 663 0.4796 MELQQQQPIKSRFRRICVYCGSSPGKSPSYQLAAIQLGEQLVERNIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPKTLMPREITGVTVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFIDKAVDEGFVTPAARHIIVSAHTAQDLMCKLEEYVPMHSGAGPKLSWEEEQQIVNTAMFDISR* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3510 220 SUPERFAMILY MCP/YpsA-like 12 191 - -
Lja1g3510 220 Gene3D - 2 190 - -
Lja1g3510 220 PANTHER LOG FAMILY PROTEIN YJL055W 6 208 - -
Lja1g3510 220 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 6 208 - -
Lja1g3510 220 Pfam Possible lysine decarboxylase 58 187 IPR031100 -
Lja1g3510 220 TIGRFAM TIGR00730: TIGR00730 family protein 15 191 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3510 Lja-Chr1 43780747 43783589 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3510 K22522 - gmx:100782787 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3510 1 43780747 43783589 Lja1g3510 1 43780747 43783589 ECH