Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3508 ATGGAAATCGAATCTAGTAATCAGCCCAAGCAAGAGCGTTCGAGGACAAGATGGACAGCATCACTTGACAAGATATTTGCAGACTTGGTTGTCAAGCACATCCAACTAGGAAACAGACCAAACGATGTTTTTGACAAGAAAACATGGAATCACATTCGTGACGACTTCAATAAGCAAACCGACCTCAATTTCAATAACAATCAATTGAGGAAGCATCTAGACGTTCTCCGAACACGCTTCCATAATCTGAAATCTGCTTATGATCAAAATAACGGCTTTGTAATAGATGATTCCTGTTGCATTGGCTTTGAACTGTGGGAAGACACAGGGGCACAACCTAGACCTGAAATAGTTAAAGTGAAAGATTGTCCCATATATGAGCAGCTGTGCACAATATTCTCAGATTCAGCTGCAGTGCCAGATGGGAAATATGCCCAATCTAGTCATTATGAAGTGGATGCCACTAGCTTAATTTCATGTTCAGAAGCTGGGGTCTCAAATCATCAATACCCATCATCATCAAAACCCATCTTAACTGCAGAGAATGTAACTAAGAATTCTCTTGATAGGAAAAAGAAACGTCCATCTGAGATGCAAACAACTAGTCTCGATCAAGACAGCTGTGATGCTATGGCAGAGGCCTTGTTAGAGATGGTTGGTGCTTATAGGTTAAGGACAATTGTTTCAACTGTAGGTGATGATAAATTTTCCGTAACCAATTGCATTAGGGCACTTGATGAGGTAGATGGCATCAACGAACAGCTCTACTTTTCTGCATTGGAGCTCTTTGAGGATCCTAGTTTAAGAGAGATATTCATTTCTTTAAAATGTGACAAGATACGACTGGCTTGGTTACAAGGTAAGTGTAGTAGGAGGAACATTCCTTAG 888 0.4043 MEIESSNQPKQERSRTRWTASLDKIFADLVVKHIQLGNRPNDVFDKKTWNHIRDDFNKQTDLNFNNNQLRKHLDVLRTRFHNLKSAYDQNNGFVIDDSCCIGFELWEDTGAQPRPEIVKVKDCPIYEQLCTIFSDSAAVPDGKYAQSSHYEVDATSLISCSEAGVSNHQYPSSSKPILTAENVTKNSLDRKKKRPSEMQTTSLDQDSCDAMAEALLEMVGAYRLRTIVSTVGDDKFSVTNCIRALDEVDGINEQLYFSALELFEDPSLREIFISLKCDKIRLAWLQGKCSRRNIP* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3508 295 Pfam Myb/SANT-like DNA-binding domain 17 95 IPR024752 -
Lja1g3508 295 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN-LIKE 1 292 - -
Lja1g3508 295 PANTHER - 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3508 Lja-Chr1 43744712 43746336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3508 - - gmx:100815137 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3508 1 43744712 43746336 Lja1g3508 1 43744712 43746336 ECH