Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3507 ATGTTGTACATAATCGGTTTAGGGTTAGGAGACGAGCGAGACATCACACTGAAAGGATTGGAAGCAGTGAAAAAATGCGACAAGGTTTACATGGAAGCCTACACTTCCCTCCTCTCCTTCGGTCTCTCCACCACCGCGCTCGAGAATCTCTACGGTAAACCCATCGCTCTTGCCGACAGAGAGTTCGTTGAGGAAAAAGCCGACGAGTTCCTCTCCGAAGCTCGCCATGCCGATGTCGCTTTCCTCGTTGTTGGGGACCCTTTTGGGGCTACCACTCATGCTGATCTCGTTGTTCGAGCGAAGAAGATGGGGATTGATGTGAAAACTGTGCATAATGCTTCAGTGATGAATGCGATTGGGATTTGTGGTCTTCAGCTTTATCGTTATGGGGAGACTGTTTCTATTCCGTTTTTCACTGATACTTGGAGACCTGATAGCTTCTATGAGAAGATTCAGGGGAATCGAAGCATGGGTCTGCACACTCTTTGCTTGTTAGATATTCGGGTGAAGGAGCCTACACTGGAATCTCTGTGCAGGGGAAGAAAAGTCTATGAGCCACCCCGATATATGACTGTAAACACAGCCATTGAGCAGCTGTTGGAGATTGGGCAAGCACGTGAAGAATCTGCATACACTGAAGATACTGAGTGTGTTGGGTTTGCTCGTCTTGGAAGTGAAGATCAGATGATAGTGACTGGAACAATGAAGCAGCTGCAGTTGGTTGACTTTGGAGCACCTTTACATTGCCTTGTCATAACAGGGAAGACCCATCCCTTGGAAGAAGAAGTGCTGGATTTTTACAGATGCAGGACGTAG 816 0.4755 MLYIIGLGLGDERDITLKGLEAVKKCDKVYMEAYTSLLSFGLSTTALENLYGKPIALADREFVEEKADEFLSEARHADVAFLVVGDPFGATTHADLVVRAKKMGIDVKTVHNASVMNAIGICGLQLYRYGETVSIPFFTDTWRPDSFYEKIQGNRSMGLHTLCLLDIRVKEPTLESLCRGRKVYEPPRYMTVNTAIEQLLEIGQAREESAYTEDTECVGFARLGSEDQMIVTGTMKQLQLVDFGAPLHCLVITGKTHPLEEEVLDFYRCRT* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3507 271 CDD DHP5_DphB 1 256 IPR004551 GO:0004164|GO:0017183
Lja1g3507 271 TIGRFAM dph5: diphthine synthase 1 265 IPR004551 GO:0004164|GO:0017183
Lja1g3507 271 PIRSF Diphthine_synth 1 271 IPR004551 GO:0004164|GO:0017183
Lja1g3507 271 PANTHER DIPHTHINE SYNTHASE 1 269 IPR004551 GO:0004164|GO:0017183
Lja1g3507 271 Gene3D - 1 113 IPR014777 GO:0008168
Lja1g3507 271 PANTHER DIPHTHINE METHYL ESTER SYNTHASE 1 269 - -
Lja1g3507 271 Pfam Tetrapyrrole (Corrin/Porphyrin) Methylases 1 238 IPR000878 GO:0008168
Lja1g3507 271 Hamap Diphthine synthase [dphB]. 1 270 IPR004551 GO:0004164|GO:0017183
Lja1g3507 271 Gene3D - 114 270 IPR014776 GO:0008168
Lja1g3507 271 SUPERFAMILY Tetrapyrrole methylase 1 267 IPR035996 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3507 Lja-Chr1 43730041 43734855 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3507 K00586 - gmx:100787586 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3507 1 43730041 43734855 Lja1g3507 1 43730041 43734855 ECH