Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3496 ATGGGGGCGGTTTGCTCGGCTGGCATGGCTGAGGGAAATGCAGAGCTTGTAGGGAACAACAAGGCTTTGGTGGTTTCTGGGAAGGTTAAGAAAGAAAACAGTTCTACAAATCGGAAAGAAAATTTTGCAGATTCTAGGTCTTATAGTCAAGGTAGTAGAAAGCACAAGAAGCATCATGGGACTGATGAATTTCGTTTATCCACTCCCAGTCCATCTGGGGGCAAACAGGTCGGCCAGAGGGTCTCTTTTCTGGGAAAAGCTAGCGAGAGGGCGGTAGAAGTTCTGGACACACTTGGAAGTGGAATGCCAAAGTTGAACAGCGGCAGTGGGTTTGTCTCTGGCATGTCTTCTAAAGGGCATAGAATATCCATATTGGCATTTGAAGTAGCTAATACGATAACCAGAGGAGCAATTTTGTTTCAGTCACTTTCTGAAGAGAACATTCAGTTTCTTAAAAAGGAGGTTTTACAATCAAAAGGGATTCAACAATTAGTCTCGACTGATATGAAGGAGTTAATAAGTCTTGCCGAGGCCGACAAAAGGGAAGAATTCACTGTCTTCTCAAGGGAAGTAACTAGATTTGGAAACATGTGTAAAGACCCACAGTGGCACAACCTAGATCGATATTTTTCAAGATTAGACTTGGATGTCATGGGCGGCAAACAATATCGTGTAGAGGCAGAAAAGACAATGCAAGAGTTTACCAATCTTGTTCAGCATACTGCTGAATTATACCATGAATTAAATGCTTATGAACGTTTTGAACAAGACTATCAGCAGAAGATCAAGGAAATGGAGTCCTTAAATATTCCTTTAAAAGGGGAGAGTATCACAATCTTTCAGAGCGAGCTTAAGCATCAAAAAAAGCTTGTGAGGAGCTTGAAAAGGAAGTCTCTTTGGTCCCGAAATTTGGAGGAGATAGTTGAAAAGCTCGTTGATATTGTTAGCTATATACATCAAGCAATTTGTGAGTTTCTTGGAAATCATGGTAATGGTGCTGCTAAGTATGGTAAGGGTCCTGAAAGACTAGGTGAAGCTGGTCTTGCACTACATTATGCTAACATCATCAATCAGATAAATATGATTGCATCTCGCCCAGCCTCTCTTCCTCCAAATATAAGGGACACATTATATCGCAGCTTGCCCAACAATATTAAAAGTGCTCTTCCATCTCGGCTGCAAACCATTGCTACCATGAAAGAGCCCTCCATCCCTCAAATGAAAGCCGAAATGGACAAGACTCTTAAGTGGCTTGCACCATTTGCCACAAACACAATCAAAGCACATCAAGGTTTTGGATGGGTAGGTGAATGGGCAAATACAAGTAATGACTTTGGTGATAACACAACCAAAGAAAGTAACCTGATTCGCCTCCAGACTCTTTATTATGCTGATAAGAAGAAGATAGATGTTCACATCATTGAGTTGTTGGCATGGCTTCACCATTTGATTAGCTCTGTAAGAACCAGACAAAATGCCTCAAGACCAATGCCAATGCCGTCACGATCTCCTCCCAAGGGACATGATGAATTTCAGTCTAAGATGCGACAGTTTCTAATTCTATCTGTGGACAGTAGCAACAAGCCGTTAGGAACTCAACTTTCTCTAGAGGATAGGAGGTTATTAGAGGAGGTAATTGCAAGGAGGAGGAGCCCAGGAGTTAGCAAAAGTGAGGAACTTGGTGCAGCTAACAAAACAAAAGCCAGACATTTGCTTAGGACCAGAAGTGCTGGGAGTGTACCTGTTAGCGAGTTCTTCGGTACAAGATTCACTGTGAGCCGCCAAAACTACAACACTTTGGATATTATGGATGGCTTGAGATGA 1824 0.4221 MGAVCSAGMAEGNAELVGNNKALVVSGKVKKENSSTNRKENFADSRSYSQGSRKHKKHHGTDEFRLSTPSPSGGKQVGQRVSFLGKASERAVEVLDTLGSGMPKLNSGSGFVSGMSSKGHRISILAFEVANTITRGAILFQSLSEENIQFLKKEVLQSKGIQQLVSTDMKELISLAEADKREEFTVFSREVTRFGNMCKDPQWHNLDRYFSRLDLDVMGGKQYRVEAEKTMQEFTNLVQHTAELYHELNAYERFEQDYQQKIKEMESLNIPLKGESITIFQSELKHQKKLVRSLKRKSLWSRNLEEIVEKLVDIVSYIHQAICEFLGNHGNGAAKYGKGPERLGEAGLALHYANIINQINMIASRPASLPPNIRDTLYRSLPNNIKSALPSRLQTIATMKEPSIPQMKAEMDKTLKWLAPFATNTIKAHQGFGWVGEWANTSNDFGDNTTKESNLIRLQTLYYADKKKIDVHIIELLAWLHHLISSVRTRQNASRPMPMPSRSPPKGHDEFQSKMRQFLILSVDSSNKPLGTQLSLEDRRLLEEVIARRRSPGVSKSEELGAANKTKARHLLRTRSAGSVPVSEFFGTRFTVSRQNYNTLDIMDGLR* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3496 607 Coils Coil 248 268 - -
Lja1g3496 607 PANTHER DUF668 FAMILY PROTEIN 1 606 - -
Lja1g3496 607 Pfam Protein of unknown function (DUF668) 342 427 IPR007700 GO:0045927
Lja1g3496 607 PANTHER OS01G0873900 PROTEIN 1 606 IPR045021 GO:0045927
Lja1g3496 607 MobiDBLite consensus disorder prediction 490 509 - -
Lja1g3496 607 MobiDBLite consensus disorder prediction 28 79 - -
Lja1g3496 607 Pfam Domain of unknown function (DUF3475) 124 180 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3496 Lja-Chr1 43569856 43575482 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3496 - - lja:Lj1g3v2184160.1 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3496 1 43569856 43575482 Lja1g3496 1 43569856 43575482 ECH