Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3494 ATGGACTCTACCGCTTCCCCTCTCTGCCCCAGCACCGTGACCATTCGCCGGAACCCTCCCCGGAGAGCTCGAGCCACTCCCAAAGCCCCAGACCCTCGTGAAATCCGCCCATTTCCTCACGATGACATTCAATCCGCCGCACAAACACCGTCAAAGTCGCCGCCGGAGATCGAAAACCTCAAAGTCTTCCTCAGAATCCGACCCATTCTATCACCCAATCAAGCTCCGCGAGCGAAAACTAAAACCGCATGGCCTCAGAACCCGATCAAAAGGAACGTTGCCGCGAAGAAGAAGAGCTCCGCCGTGTGCTTATCGGTTAACGATCCTCAGTCGGTGACGCTATCAACTCCCTCGAGCCTGCAGGAATCGAAGCGGATCAAATCAGAGACTTACGGTGGCTTCTCTCACGTTTTCTCTTCCGATTCATCGCAGTGTGATGTGTATGAAACAATGGTGAGACCCATGGTGGATGAGTTTCTTAAGGGTAGGAGTGGAATGCTGGCTGCATTGGGGCCTAGCGGGTCAGGGAAGACTCATACCGTGTTTGGAAGCCCAAGGGATCCTGGAATGGTACCTCTAACCCTTCGCCATATCTTCAAGGAGACTGAGCAAAATAGCAAACAAGCTTCCAGATCATATTACATATCAATTTTTGAGATATATACTGAACGGGGTAAAGCAGAGAAGCTGCTTGATTTATTACCGAATGGCAGTGAACTAAGCATGCAGCAATCCACTGTAAAAGGCATGCAAGAGGTTCTCATCTCTAATGTTGAACAGGCAGATTCCCTAATAACACAAGCAATGTTGAAACGGGTAACTGCAATGACAAACACCAACAGTCAGTCCAGCCGGTCACAGTGCATCATTAGCATTCGTGATGTTCCCCAAAAATGTAAAGGAGTTGTCAATCCTAAGTCAAATGGTGCTGTTTTGACCATCATTGACCTTGCTGGAGCTGAAAGAGAAAAAAGAACAGGGAATCAGGGGACAAGATTGGTTGAAAGCAATTTTATTAACAACACATTAATGGTGTTTGGCTTATGCTTAAGATCTTTATTGGAGCACCAGAAAAATCCAAAAAAGCCATTGCAGAAGCACTTCCAAAACTCTATGTTAACTAGGTATCTACGAGATTATTTGGAGGGCAAGAAGCGCATGACATTGATTTTAACAGCGAAGTCAGGAGAGGATGATTATCTTGATACATCTTACCTACTGAGACAAGCTTCACCTTACATGCAAATTAAGTATAATGAAGTTGAACCACCAAATTTGGTTCCCAATAAAAGACATTACCAAGCTTCCATAATGGATAACGTGAAGCTATCACCTTCTCTACAACATAAGAGAGTTAGACTTGTTGGTAAACATTCAGTGCAGAATGATGAAAAGGATGTTGAAGAATGCAACACTTCTAAGGAAGATGCTTCAACAGTTTGCAAATTAGATGCAAGTAGTACTGTCGCTTTCGAGTTAGAGAGTGACCACGCCCAAAGCGAGAGAAGTCATATTATTATGCAAAATTTTGCAAGAGTTATATGGAATTGTTTGAAGCAATATAATTCCAAACTAAAGGTTGCGGAATTGGAAATTCAAAGTCTCAAAGAAAGCATCGGGGATGAAAAGAAAAAAAGCCTTGAGCTAGAAACGCAGTTGAATGAGTTTAAAGCCTGCTGTACTTGTTCCAAAGGAGGAATCGAAAAAACTGATACTGAAGATTCTTCATCACTTTTAATTGCAATATTACTATTTATGTTATTTAGTCGTCCATTCATTTTCAGGAAATGTTGCACTCAAAGTCATCATATGAGAATATACTTAACCAATCAGATGAAGAACTTACGCTTGGCACTTCCGTCATCATATGAGAATATACTTGACCAATCAGATGAAGAACTTACGCTTGGCACTTCCGGTACAGAAGTTGAAGTTGATTTTGAAAAATCAAATAGGGAACTCTCAGTCTCCCTATCAAAGCTAGGACATCATAAGGCTTTGGAGGTTGATTCAGTTAGCGAGATATCTAGTGAAACTTCTCATTTGGAGACGTCGTTTGAGCCTAGACTTGATCAGCCAGATAAAGAGTCTGTGCTTGGTACTTCCTGTCCAGTGTTAGATTCTGAAAAATCAGATAGGTTAGTCTCTCGACTAATGATCTTCCACGTGCAAATCATGTTGTTTTTATTGACTTTTAAATTATATGTTTGTTCCTTATTAGGGAAGTCTCAATCTCCTCATCAGAGCCAGGGCATCTTGAAGCTTTGGAGGGAAGTCTCAATCTCCTCATCAGAGCCAGGGCATCTTGAAGCTTTGGAGGTTGATATTGTGAGCAACAAACCATGTCAATATTATTATGTATTTTATTTGGTTATTCATTCTTTCCAGTTGGATGATCCAAGTGGTGCGAAGGCAGGAGTCAATAACTCCAAGCCTCCTAGGCCAAAAAGGACACTTGTGCCTTCCTCATCCATCTTATCAAGGGACTTGAGTACCTTTGATCTTTGTGCTGAACCAGAGAAATCAAAGGTACCGCATAAATTTCAATTTTTGAATCCGGATATCAGATACCTCCCTTGCACATCTCGTGGCTATGATTATGAGGAGGTTGCGGTGGAATTTCACTCCCAACCCAGAACCACCACCACCACCAACCCAGAACTCCTCACAAACCCCAGATCCAAACCACCACCCAAAACCCACTCCCAATCCATGCCACCACCAAAGAGAAGAAGAAGGTGGGTCGTGATTGAAGTCTCAACCCAGGAGATGCAATCGGATCTGGAAAAAATTTCGAAGGCACCAAATCTTTGTATTGGTTTTAAAAAAATGCATACATTCTTCCATATTTACCCTTTATTATTTTTTCTCACTAGTAATCACTGCATTAAGAGTATGTGA 2901 0.4233 MDSTASPLCPSTVTIRRNPPRRARATPKAPDPREIRPFPHDDIQSAAQTPSKSPPEIENLKVFLRIRPILSPNQAPRAKTKTAWPQNPIKRNVAAKKKSSAVCLSVNDPQSVTLSTPSSLQESKRIKSETYGGFSHVFSSDSSQCDVYETMVRPMVDEFLKGRSGMLAALGPSGSGKTHTVFGSPRDPGMVPLTLRHIFKETEQNSKQASRSYYISIFEIYTERGKAEKLLDLLPNGSELSMQQSTVKGMQEVLISNVEQADSLITQAMLKRVTAMTNTNSQSSRSQCIISIRDVPQKCKGVVNPKSNGAVLTIIDLAGAEREKRTGNQGTRLVESNFINNTLMVFGLCLRSLLEHQKNPKKPLQKHFQNSMLTRYLRDYLEGKKRMTLILTAKSGEDDYLDTSYLLRQASPYMQIKYNEVEPPNLVPNKRHYQASIMDNVKLSPSLQHKRVRLVGKHSVQNDEKDVEECNTSKEDASTVCKLDASSTVAFELESDHAQSERSHIIMQNFARVIWNCLKQYNSKLKVAELEIQSLKESIGDEKKKSLELETQLNEFKACCTCSKGGIEKTDTEDSSSLLIAILLFMLFSRPFIFRKCCTQSHHMRIYLTNQMKNLRLALPSSYENILDQSDEELTLGTSGTEVEVDFEKSNRELSVSLSKLGHHKALEVDSVSEISSETSHLETSFEPRLDQPDKESVLGTSCPVLDSEKSDRLVSRLMIFHVQIMLFLLTFKLYVCSLLGKSQSPHQSQGILKLWREVSISSSEPGHLEALEVDIVSNKPCQYYYVFYLVIHSFQLDDPSGAKAGVNNSKPPRPKRTLVPSSSILSRDLSTFDLCAEPEKSKVPHKFQFLNPDIRYLPCTSRGYDYEEVAVEFHSQPRTTTTTNPELLTNPRSKPPPKTHSQSMPPPKRRRRWVVIEVSTQEMQSDLEKISKAPNLCIGFKKMHTFFHIYPLLFFLTSNHCIKSM* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3494 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 417 IPR027417 -
Lja1g3494 966 MobiDBLite consensus disorder prediction 24 40 - -
Lja1g3494 966 PANTHER KINESIN-RELATED 57 661 IPR027640 GO:0003777|GO:0007018
Lja1g3494 966 MobiDBLite consensus disorder prediction 876 912 - -
Lja1g3494 966 Pfam Kinesin motor domain 108 412 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3494 966 ProSiteProfiles Kinesin motor domain profile. 59 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3494 966 MobiDBLite consensus disorder prediction 1 56 - -
Lja1g3494 966 MobiDBLite consensus disorder prediction 876 898 - -
Lja1g3494 966 SMART kinesin_4 57 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3494 966 Coils Coil 518 545 - -
Lja1g3494 966 PRINTS Kinesin heavy chain signature 162 183 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3494 966 PRINTS Kinesin heavy chain signature 277 294 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3494 966 PRINTS Kinesin heavy chain signature 366 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3494 966 PRINTS Kinesin heavy chain signature 311 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3494 966 PANTHER KINESIN-LIKE PROTEIN KIF23 57 661 - -
Lja1g3494 966 Gene3D Kinesin motor domain 57 454 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3494 Lja-Chr1 43518624 43535642 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3494 130 419 Miscellaneous Gene Families AT2G21380 30.100 1.17e-23 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3494 K10401 - gmx:100794655 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3494 1 43518624 43535642 Lja1g3494 1 43518624 43535642 ECH