Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3488 ATGAGAGGGATCAATCGAGTGATGTTCGCAGGCAGAGCCTTAACACGCGCCACCACCGCCGCCGCCGTCGGCACCCTTCACCAACTACCGCGAGTAGCTCCTTTTGGCGGCGCATGCGGGAGTTTTCACCCTCTGAATCTCGTTGATCGCTCGAGTCCCTCTGAAGCTCACAGCGTCACCGGATTCAGGTATCATAGTTCTGCTGCTGCTGCCGCTACGTCTCTAGCTCAAGACCTCCAGGCCAAGGGTTCAGAAACGGGAATCAAACCCAAAAACTGTGTTCTCTTTCAATACGAGGCTTGCCCTTTCTGTAACAAGGTTAAAGCATTTCTGGACTATTATGATGTTCCATACAAAGTAGTGGAAGTAAACCCAATGAGCAAGAAGGAGATCAAATGGTCTGACTACAAGAAGGTTCCTATTCTGACTGTTGATGGTGAACAAATGGTTGATTCTTCAGACATAATTGATAAGTTGGTCAAAAGGATACGTCCAGATTATGACCTTAATGCAGATGAAGAGAAGAAGTGGCGCGAGTGGGTGGATAATCACTTGGTGCATGTTTTGTCTCCAAACATATATCGAACTGTTTCCGAGGCTCTTGAATCGTTTGAATATATAACAACTCAAGGCAATTTCAGTTTATCTGAGAGGTTAGTGGCAAAGTATGGTGGGGCTGCAGCTATGTATTTTGTGTCAAAGAAATTGAAGAAGAGACACAATATCACTGATGAGCGTGCTGCATTGTATGGAGCTGCAGAACAGTGGATTGATGCTTTGAAGGGCCGAAAATTTCTTGGTGGATTGGATCCCAATTTAGCAGATCTCTCAGTCTTTGGTGTTCTAAGACCCATCCGCCACCTCAAGTCAGGTAGAGATATGGTAGAGCATACACGGATTGGGAAATGGTATTCTGAGATGGAACAGGCAGTAGGACAGTCTTCCAGGGTGACTGAGCGTGTGTAG 966 0.4638 MRGINRVMFAGRALTRATTAAAVGTLHQLPRVAPFGGACGSFHPLNLVDRSSPSEAHSVTGFRYHSSAAAAATSLAQDLQAKGSETGIKPKNCVLFQYEACPFCNKVKAFLDYYDVPYKVVEVNPMSKKEIKWSDYKKVPILTVDGEQMVDSSDIIDKLVKRIRPDYDLNADEEKKWREWVDNHLVHVLSPNIYRTVSEALESFEYITTQGNFSLSERLVAKYGGAAAMYFVSKKLKKRHNITDERAALYGAAEQWIDALKGRKFLGGLDPNLADLSVFGVLRPIRHLKSGRDMVEHTRIGKWYSEMEQAVGQSSRVTERV* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3488 321 SFLD Prostaglandin E synthase like.1 61 318 IPR034334 GO:0050220
Lja1g3488 321 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 1 318 - -
Lja1g3488 321 Pfam Glutathione S-transferase, N-terminal domain 95 162 IPR004045 -
Lja1g3488 321 PANTHER GLUTATHIONE S-TRANSFERASE FAMILY PROTEIN 1 318 - -
Lja1g3488 321 ProSitePatterns Glutaredoxin active site. 95 111 IPR011767 -
Lja1g3488 321 CDD GST_C_mPGES2 167 312 IPR034335 -
Lja1g3488 321 SUPERFAMILY Thioredoxin-like 93 185 IPR036249 -
Lja1g3488 321 Gene3D - 169 317 - -
Lja1g3488 321 SUPERFAMILY GST C-terminal domain-like 171 311 IPR036282 -
Lja1g3488 321 ProSiteProfiles Glutaredoxin domain profile. 81 177 - -
Lja1g3488 321 Gene3D Glutaredoxin 83 164 - -
Lja1g3488 321 SFLD Glutathione Transferase (cytosolic) 61 318 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3488 Lja-Chr1 43478639 43481607 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3488 K05309 - gmx:100804696 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3488 1 43478639 43481607 Lja1g3488 1 43478639 43481607 ECH