Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3479 ATGCTTATCTTTGGTGGTGGTGACTGTCAGAACGGTAGGTCACGCAAAGAATGTGACAAAGATAGCTTTTCTGGCAAGCCAAACGTAAACAGAGAATACCTGAAAGCATTCAGAACAAAATCTTACGTTGAAATATGCAACAAAGCTCAAGAGCAGAAATCAGACTCTTCCATGTCTTCTCCCCTTACTTCCTTCATGCATCTTACTGAATGTTTGCTGGAACCCCGACAAGAAATTGTGACAAACATGACACGGAGCATGAAGATGCATCATCTTTTGGTGGATTACTTCGAAGCCACCTTAGAAGCATGCCGTTGTTGCGACACAATCCTTGAAGGCGTGCGCCAAACACGGCTTGCCAGTGATAGAATCACAACCATTGTTAAGCAAAGCAAAAGAGTGCAATTTGATGGAAACCAATGTATCTATACAAAGCTTGCTTCCTTTGTATTGCAAGATAACCCTTTGTCCAGTGTAAGCTTCGGCGACATCCATGAAAGATACATGTTGCTCCTGCAAAGACTAAATTCAAAGAGAGGGAAAACCCAAAGAAGATTAATAATTAAGCGGGTTTGCAAGAAGGTTGGAAAAACAGGTCTAGTCATTTTGCAAAGTGCTCTTGTGGTGGCTTCACTAGTCGTTGCTTTCCATAGCATAATTGGGATTGTTGTTGCACCCTGTATCATGGGTAGTTTTTTTGGTTTCATGAGGAAGAGATTCAAGTGGGTTCATAAAAGGCAGAGGAGCAGAAACACTTCTGAAGGATTATACCAGCAACTTGATGTTGCTGCTAAAGGGGTTTTTATACTGATCAATGATTTGGATACTATGAGCCGTGTGGTTAAGAGGTTAGACGATGAGGTAGAACATTGGAGAGAGGTTGCTGATATCTGTGTGAAGAATGGCACCAGTTGCAGGGGTGAAATACTAGAGCATGTTGTGAGGGAATTTCATGACCACGAATCTAGCTTTGTGGATATGTTGGAAGAGCTTGAAGAGCATGTCTATTTGTGTTTTCTCACCATAAACAGATCTAGAAGACTAGTTATGGAAGCTATTACAGAGGAGCAACATTAA 1077 0.415 MLIFGGGDCQNGRSRKECDKDSFSGKPNVNREYLKAFRTKSYVEICNKAQEQKSDSSMSSPLTSFMHLTECLLEPRQEIVTNMTRSMKMHHLLVDYFEATLEACRCCDTILEGVRQTRLASDRITTIVKQSKRVQFDGNQCIYTKLASFVLQDNPLSSVSFGDIHERYMLLLQRLNSKRGKTQRRLIIKRVCKKVGKTGLVILQSALVVASLVVAFHSIIGIVVAPCIMGSFFGFMRKRFKWVHKRQRSRNTSEGLYQQLDVAAKGVFILINDLDTMSRVVKRLDDEVEHWREVADICVKNGTSCRGEILEHVVREFHDHESSFVDMLEELEEHVYLCFLTINRSRRLVMEAITEEQH* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3479 358 PANTHER UPF0496 PROTEIN 3-RELATED 15 357 IPR007749 -
Lja1g3479 358 PANTHER UPF0496 PROTEIN 2-RELATED 15 357 - -
Lja1g3479 358 Pfam Protein of unknown function (DUF677) 55 353 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3479 Lja-Chr1 43382593 43383970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3479 - - lja:Lj1g3v2239510.1 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3479 1 43382593 43383970 Lja1g3479 1 43382593 43383970 ECH