Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3478 ATGTCGTCGACCATAAACACGGACCAGATCATCGTCGACGAATCCAAATGTTCAGAAATCGAACGACCGCAACAGAGAAACGAGGAAGATGAAGAAGCAGAGTTACAGAAGCTTCTACTCCCCAACGTGGATGAACTTCCCCTCACTCCTCCTTCCGCCGTTGAAACCAACTTTGTCTCTTACTTCGCTCTCGATTTTACGAAGCCAGGTCATGATCATTACATTTACCGGCACGCCAATGGGTTGTGCGTGATCGGGTTGGCGCCTTCCCATATTGCTTTCAAGGATGAAGGTGGAATCACAGCTGTAGATTTCAATGTTGGAAAGTCTGATCGTAGCGGGATGAAGGTCACTGGAAAGCGGAAGAAGAATGCACAACACCTTGAGTCCAACTCGGCTTTGTGTAAAATTTCTACAAAAAATTATTCTTATATCGTGAGGTGTTGTGTGAAAGGTTCCCTTTTGGAAGTGAATCAACAGTTAATCAAGCAGCCAGAATTGCTTAATGTTTTGGCTGACAGAGAAGGATACATTGCTATTGTCATGCCAAAACCAGCTGATTGGCTCAAGGTCAAGGATTCCCTTGTCAGCATTCAGGAGTACAAGAAAGCGAGGGGAACCAATTGA 627 0.4514 MSSTINTDQIIVDESKCSEIERPQQRNEEDEEAELQKLLLPNVDELPLTPPSAVETNFVSYFALDFTKPGHDHYIYRHANGLCVIGLAPSHIAFKDEGGITAVDFNVGKSDRSGMKVTGKRKKNAQHLESNSALCKISTKNYSYIVRCCVKGSLLEVNQQLIKQPELLNVLADREGYIAIVMPKPADWLKVKDSLVSIQEYKKARGTN* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3478 208 SUPERFAMILY Single hybrid motif 67 204 IPR011053 -
Lja1g3478 208 Gene3D - 63 205 - -
Lja1g3478 208 PANTHER UNCHARACTERIZED 16 206 IPR039169 -
Lja1g3478 208 Pfam Glycine cleavage H-protein 99 204 IPR033753 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3478 - - gmx:100775677 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3478 1 43379890 43382380 Lja1g3478 1 43379890 43382380 ECH