Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3473 ATGAGGATGGAGATGAAGGATGGAACTGAAGCTCTCGTGAATAACAACGGTCACTGTGAGGAAGAACAAGTTTCAAGCTTGAAGTTATCTCATCTGCTTGCATCTAAAGATCGTGATTTTCTGCTTGCTCCATCTGGGGCTCAGGTGAAAGTTTCTGATCTTGAAGGGAAAATAGTGGGTTTCCTATTCGCTGCAAACTGGTACCCACCATGCCGTGGATTCATCCAATTACTCGCTGGTGTCTACGAGGACCTGAAATCCAGCGTCCCTCATTTCGAGATCGTGTACGTGTCCTCTGATGAAGACATGGATGCCTTTAACAGCTTCTATGAAACCATGCCGTGGCTTGCGATTCCGTTCTCAGATTTGGAAACGAAGAAAGCATTGACCAGAAAGTATGATGTGGAGGGGATTCCATGCTTGATCATGTTGCAACCAGCTAAAGATCACGTTAAGGAGGACGACGCAACGCTTCGCAATGGTGTTGAGCTTGTTCATCGTTATGGGACGCAAGCTTATCCGTTTAGCAAGGAGAGGGTTGAGCAGTTGCTGGAGGAAGAGAAAGAGAAGCGTGAAAATCAGACTCTCACTAGTTTGCTGGCGAATCAACATAGAGACTATGTTTTGAGTCACGCGGGGCGAAATCAGGTACCTGTTGCATCTCTAGTGGGTAAAACAATTGGGCTCTACTTCTCGGCCGGATGGTGCGTCCCATGCTCAAAGTTCGCACCCAAATTGATTTCCGCATATCACAAAATCAAACAAACACTAGCTGAAAAAGCATCATCAGAAGAAGAAGACTTTGAAATCGTGCTAGTTTCTCACGACCGTGACCAATCCACTTTCAACTCCTACTACAGCACCATGCCATGGTTAGCATTACCCTTCGGAGACCCCGAGATTAAGAACCTTGCTAGGCACTTCGATGTGCAAGGGATACCTTGTTTGGTAATTCTAGGCCCTGATGGCAAAACAATGACAATACATGGAAGGAGCTTGATAAATTTGTACAAGGAAAATGCGTACCCTTTCACTCGTGCTAAAGTGGAGCAGCTTGAGAAACAGCTTGAGGAAGAGGCGAAGGACCTTCCAACGTTGGTGTTTCATGAGGGGCACCGCCATGATTTGAATTTGGTGTCGGATGGGAATGGGGGTGGGCCTTTTATCTGCTGTGTTTGTGATGAGCAAGGTTCTAGCTGGGCTTACCAGTGTCTTCAATGTGGCTATGAGGTGCACCCAAAGTGTGTCACAACTGTGCACCGTGACAACAATGTCTTGGTGGGCAGGGTAGGTAATTAA 1299 0.4673 MRMEMKDGTEALVNNNGHCEEEQVSSLKLSHLLASKDRDFLLAPSGAQVKVSDLEGKIVGFLFAANWYPPCRGFIQLLAGVYEDLKSSVPHFEIVYVSSDEDMDAFNSFYETMPWLAIPFSDLETKKALTRKYDVEGIPCLIMLQPAKDHVKEDDATLRNGVELVHRYGTQAYPFSKERVEQLLEEEKEKRENQTLTSLLANQHRDYVLSHAGRNQVPVASLVGKTIGLYFSAGWCVPCSKFAPKLISAYHKIKQTLAEKASSEEEDFEIVLVSHDRDQSTFNSYYSTMPWLALPFGDPEIKNLARHFDVQGIPCLVILGPDGKTMTIHGRSLINLYKENAYPFTRAKVEQLEKQLEEEAKDLPTLVFHEGHRHDLNLVSDGNGGGPFICCVCDEQGSSWAYQCLQCGYEVHPKCVTTVHRDNNVLVGRVGN* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3473 432 SUPERFAMILY Thioredoxin-like 42 146 IPR036249 -
Lja1g3473 432 Gene3D Glutaredoxin 199 348 - -
Lja1g3473 432 Pfam Thioredoxin-like 224 324 IPR012336 -
Lja1g3473 432 Pfam Thioredoxin-like 56 146 IPR012336 -
Lja1g3473 432 ProSiteProfiles Thioredoxin domain profile. 166 361 IPR013766 -
Lja1g3473 432 PANTHER THIOREDOXIN 21 415 - -
Lja1g3473 432 Coils Coil 342 362 - -
Lja1g3473 432 Gene3D Glutaredoxin 32 176 - -
Lja1g3473 432 Coils Coil 177 197 - -
Lja1g3473 432 Pfam C1 domain 371 416 IPR004146 -
Lja1g3473 432 SUPERFAMILY Cysteine-rich domain 360 418 IPR046349 -
Lja1g3473 432 SUPERFAMILY Thioredoxin-like 204 327 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3473 Lja-Chr1 43331658 43337867 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3473 K17609 - gmx:100815038 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3473 1 43331658 43337867 Lja1g3473 1 43331658 43337867 ECH