Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3469 ATGGATTCCCTCTCTCTCTTCTGCACCGGAGCTCTCATCGCCGGCGGCCTATACTGGTTCGTCTGCGTTCTCGGCCCCGCCGAACAAAAGGGCAAACGCGCCGCCGATCTCTCCGGCGGATCCATCTCCGCCGAGAAAGTCCAGGACAACTACGACCAGTACTGGTCCTTCTTCCGCCGCCCCAAGGAGATCGAAACCGCCGAGAAGGTCCCCGATTTCGTCGACACCTTCTACAATCTCGTCACCGACATCTACGAGTGGGGTTGGGGCCAGTCCTTCCATTTCTCCCCTTCCATCCCCGGGAAATCTCACCGCGACGCCACGCGCCTCCACGAGGAGCATGCCGTCGATCTAATCGAGGCCAAGCCGGGTCACAAGATCCTCGATGTGGGATGCGGAGTTGGTGGGCCCATGCGTGCCATCGCCGCCCACTCGCGAGCCAACGTCGTGGGGATCACGATCAACGAGTATCAGGTGAATCGGGCCAGGCAGCACAACAAGAAGGCGGGTTTGGATTCTCTCTGCGAGGTGGTGTGTGGGAATTTCCTCCAGATGCCGTTTTCCGATGAGACATTCGACGGCGCGTACTCGATCGAGGCGACATGCCACGCGCCGAAGCTGGAGGAGGTGTACGCGGAAATCTTCCGGGTTCTGAAGCCGGGGGCTCTCTACGTTTCCTACGAGTGGGTCACGACGGAAAAGTACGTGGCGGAGAATCCTGAACACGTGGAGGTGATTCAGGGGATCGAGAGAGGCGACGCGCTGCCAGGGCTGAGGAGCTACGCTGACATCACTGCGGCGGCGCGTAAGGTGGGGTTCGAGGTGGTGAAGGAGTTGGATCTGGCGAAACCACCGGCGCTTCCGTGGTGGGACCGGTTGAAGATGGGTAGGATCGCGTACTGGAGGAACCACATTGTGGTGACTGTTCTCGCCGCATTGGGAATCGCGCCGAAGGGGACGGTGGATGTTCATGAGATGCTGTTCAAGACCGCTGACTTTTTGACCAGAGGAGGTGACACTGGAATCTTCTCCCCGATGCATATGATCCTCTGCAGAAAACCCAAAGTCAACAAAAACGACGACGCTTAA 1089 0.5895 MDSLSLFCTGALIAGGLYWFVCVLGPAEQKGKRAADLSGGSISAEKVQDNYDQYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEHAVDLIEAKPGHKILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARQHNKKAGLDSLCEVVCGNFLQMPFSDETFDGAYSIEATCHAPKLEEVYAEIFRVLKPGALYVSYEWVTTEKYVAENPEHVEVIQGIERGDALPGLRSYADITAAARKVGFEVVKELDLAKPPALPWWDRLKMGRIAYWRNHIVVTVLAALGIAPKGTVDVHEMLFKTADFLTRGGDTGIFSPMHMILCRKPKVNKNDDA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3469 362 PANTHER 24-METHYLENESTEROL C-METHYLTRANSFERASE 3 1 356 - -
Lja1g3469 362 CDD AdoMet_MTases 126 230 - -
Lja1g3469 362 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Lja1g3469 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 354 IPR029063 -
Lja1g3469 362 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Lja1g3469 362 Pfam Sterol methyltransferase C-terminal 292 354 IPR013705 GO:0006694|GO:0008168
Lja1g3469 362 PANTHER - 1 356 IPR044625 GO:0008168|GO:0032259
Lja1g3469 362 Gene3D Vaccinia Virus protein VP39 44 306 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3469 Lja-Chr1 43281497 43283324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3469 116 276 Acyl Lipid Metabolism Gene Families AT1G73600 29.193 4.26e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3469 K08242 - gmx:100791154 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3469 1 43281497 43283324 Lja1g3469 1 43281497 43283324 ECH