Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3468 ATGGCGAGTTCCAATATGGAGAAATTGTATGGTTTGAGCCATGTGTTCATGACTCTGTTTCTTCATAACTTCTCGACACACATGGTGATTCCGGCCATCACCGATGTCACGATGGCCGCGCTTTGTCCCGGACAAGATGAATGCTCACTTGCCATCTATCTCACTGGTTTTCAACAGGCGATGATAGGAGTGGGAACGCTTGTGATGATGCCCCTCTTAGGTAATCTCTCAGATAAGTATGGAAGGAAGGTCATCCTCACGGTTCCCATGATCCTCTATATTATTCCCATAGGCATTTTAGCTTATAGCAAGACGAGAGAATTCTTCTACGTGTATTATGTGTTTAAGACACTTGTTGCCATGATTTGCGATGGAAGCGTTCCTTGCCTCGCTCTAGCTTACGTGGCAGATAACATTCCAGAAAGTGGAAGAGGCACGGCGTTTGGAGTTCTTTCAGGGATAGGCTCCGCCGCATACGTCTGCGGAACCCTCTCAGCTCGATTCCTATCTACTGCTGTAACTTTCCAGGTTTCCACTCTTGTCGCGGTGCTTGGATTGGTTTATATGCTAATTTTCCTTCAGGATACGGTCATCGATGAGAAACAACTTTATACCCCAATCATTTCTGAGGGAAAACCTGCGGCTGCTAAAATCGAACGAAAATCGAAAAGCAATGTTGAATTGCTTAAAGCATTGGGTTCTTTGAAGGACCTATCCTCCTTCCTCACAAGCAGCTTGACTATTACACAAGCAGCAAGTATTGCATTCTTCAGCAACCTTGCAGATGTTGGCCTTTATGGTTCAATAATGTATTATTTAAAGGCCCAGTTTCATTTTGACAAGCATCAGTTTGCTGACTTGATGGTTATTAATGGGATTGCAGGGACTGTGTCGCAGCTTCTTCTTATGCCTGTTCTGGTTCCTATTTTGAGTGAGGCAAAGCTGCTTTCAATTGGACTATTCTTTCACTGTGTACATATGTTCATTTACAGCATAGCATGGACCTCCTGGGTTCCTTATGCCGCTGCAATGTTTTCAATTTTGTTTAATTTCTCACAACCGTGTATACGGAGTATTGTGTCAAAACAAGTTGGACCCCATGAGCAGGGAAGGGCACAGGGTTGCATCTCAGGCATATGTTCAATTGCACATATTGTTTCTCCCTTGGCTTTCTCTCCATTAACGGCTCTCTTCCTGTCTGAAAGGGCACCTTTCAATTTTCCTGGCTTCAGTATAATGTGTATTGGCTTTGCTTCGATGGTATCTTTTGTCCAGAGTATAATGCTTAGAGTAATTCCTCCCGTTTTGAGCTAG 1314 0.4384 MASSNMEKLYGLSHVFMTLFLHNFSTHMVIPAITDVTMAALCPGQDECSLAIYLTGFQQAMIGVGTLVMMPLLGNLSDKYGRKVILTVPMILYIIPIGILAYSKTREFFYVYYVFKTLVAMICDGSVPCLALAYVADNIPESGRGTAFGVLSGIGSAAYVCGTLSARFLSTAVTFQVSTLVAVLGLVYMLIFLQDTVIDEKQLYTPIISEGKPAAAKIERKSKSNVELLKALGSLKDLSSFLTSSLTITQAASIAFFSNLADVGLYGSIMYYLKAQFHFDKHQFADLMVINGIAGTVSQLLLMPVLVPILSEAKLLSIGLFFHCVHMFIYSIAWTSWVPYAAAMFSILFNFSQPCIRSIVSKQVGPHEQGRAQGCISGICSIAHIVSPLAFSPLTALFLSERAPFNFPGFSIMCIGFASMVSFVQSIMLRVIPPVLS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3468 437 SUPERFAMILY MFS general substrate transporter 15 422 IPR036259 -
Lja1g3468 437 Pfam Major Facilitator Superfamily 15 388 IPR011701 GO:0022857|GO:0055085
Lja1g3468 437 Gene3D MFS general substrate transporter like domains 12 433 IPR036259 -
Lja1g3468 437 CDD MFS_SLC46_TetA_like 15 426 - -
Lja1g3468 437 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 11 432 - -
Lja1g3468 437 ProSiteProfiles Major facilitator superfamily (MFS) profile. 11 437 IPR020846 GO:0022857
Lja1g3468 437 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 11 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3468 Lja-Chr1 43261843 43271489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3468 7 433 Organic Solute Cotransporters AT2G16990 43.750 1.39e-115 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3468 - - gmx:100789917 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3468 1 43261843 43271489 Lja1g3468 1 43261843 43271489 ECH