Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3460 ATGCAGATGCGCAGCTCGTTCCTCAGGAAGGTTGTGTTGTCTTCTAGCCCCTTGCAGAGCGATGACTTCGCCGCGTTCGCCATGGTTCGTGACCACAATCTGGCGTTCTGCAAAAAGGGGTTTGATTCATGGGTTTTTGTTTGTGGTGATCTTTACTTCTGGGAAGATGTTGTTCATCACGAGAATGGGTTGTTCTATGCGGTGAGCAATGGAGGAACGATTGCAGTGTGTGATATTGTTCACACGGTGGCGCTGGGGAGATTCTCCGGTGACATTCACTACGTTGTGTTTTCCGGGGAGGATTTGTTGGTGGCCAGTAGGGAGCTGAAGCAGGAGCTTCCTGATGCGGGAGATGAATCAAACCAGGTTTACAGGACGGTTCGGTTCGAGGTTTTGAAGATGGATTGGAAGGGGTTGAAATGGGATAAGATTGAAAGTTTGGGAGATAAGGTGTTGTTTGTTGGGGGGAATTCTTCGCTTTCGTTTTCTGCTTCTGATTTTGGGGGATGTTGTGAAGCTGATTGCATCTATTTCACTGATGATTATTCTGAGTCTAATCGCGACGATGCGTGTGGGAAACATGACTTGGGCATATTTAGATTACAGGATCAGAGCATTGAGCCTTTGCCTTGTTATTCAAGAAATTCATATTCTGGGTTGGGTTGGCCGCTTCCAATTTGGCTGACTCCAAATCCATGTTAA 702 0.4687 MQMRSSFLRKVVLSSSPLQSDDFAAFAMVRDHNLAFCKKGFDSWVFVCGDLYFWEDVVHHENGLFYAVSNGGTIAVCDIVHTVALGRFSGDIHYVVFSGEDLLVASRELKQELPDAGDESNQVYRTVRFEVLKMDWKGLKWDKIESLGDKVLFVGGNSSLSFSASDFGGCCEADCIYFTDDYSESNRDDACGKHDLGIFRLQDQSIEPLPCYSRNSYSGLGWPLPIWLTPNPC* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3460 233 Pfam Protein of unknown function (DUF295) 143 199 IPR005174 -
Lja1g3460 233 PANTHER F-BOX PROTEIN SKIP23-LIKE 4 231 - -
Lja1g3460 233 PANTHER OS07G0183000 PROTEIN-RELATED 4 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3460 Lja-Chr1 43103311 43109218 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3460 - - gmx:100817517 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3460 1 43103311 43109218 Lja1g3460 1 43103311 43109218 ECH