Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3454 ATGGAGGAAATGAAGATAAGTACTAGTGCTAGTACTACTACACCGAGAGAGACACAGTACTCTGCTTCTTCTTCAATGATGAGTTCAACCAAAAAACCTTTGGGGTTTCTGTTTTACATGAACACTAGTACTCCCTTAGCTAGCCCCATGAAGAAGGCCATTGAAAGCATCTTTGAAGAAGTTGGTCGCTTCACCAAGCTTGACTCACAAGATGATTGGCTTCCAATCACCGAGTCCAGGAATGGAAATGCTTATTATGCTGCATTTCATGTCCTTAGTTCCGGGATCGGATTTCAAGCACTTGTTCTTCCCTTGGCCTTCACCACTCTAGGATGGATTTGGGGAATTTTGTGTTTGTGTGTGGCTTTCACATGGCAGCTCTACACGTTGTGGTTACTGGTTCAGCTTCACGAATCCGACACAGGAGTGCGCCATAGTAGGTACATCAAACTTGCTATGGCAGCATTCGGGGAAAAGCTAGGAAAACTTCTGGTACTCTTCCCTGTCCAGTATTTATCTGGTGGAACGTGTGTAACACTAATCATGATTGGAGGTGGCACCATGAAGATCTTCTTTCAGACTGTATGCGGAGGAGAGACACTCACAACCATAGAGTGGTATTTGGTGTTTACAGGGGCAGCCATTTTGCTTGCCCAGCTTCCAAACCTGAATTCAATGGCAGGGGTTTCCCTCATAGGAGCCATCACTGCTGTAGCTTATTGTTCTCTCATATGGACTGTGTCTATAGTCCAAGGCAAACTTGCTCATGTATCCTATGAGCCACCAAAAGGACAATCTGGAATTTTCATTGTGTGGAATGCATTTGGCATTGCTTTCAGAGGTCACAATCTTGTCTTGGAAATACAGGGAACCATGCCTTCAGATGCCAAGCAACCCTCACGCGTAGCAATGTGGAAAGGAACTATGTTTGCTTACATGGTCATCGCTTTTTGTTTGTTTCCCCTAGCCATCGGAGGTTACTGGAGCTATGGAAATTTGATACCTTCCACCGGAGGAATGTTAAGTGCTTTGCACAAGTACCACGAGCATGATACATCAACGTTCATCATCGCTTTGACAAGCTTGCTAGTTGTCATCAACAGTCTTAGTTCCTTCCAACTCTATGCAATGCCAATATTTGACAATCTGGAATCCAGGTACACAATCAAGAAGAACAGACCTTGTCCAAGGTGGCTGCGAGTTGTGATCAGGGTTCTCTTCGGATGTCTTGCTTTTTTTATTGCCATAGCATTTCCATTCTTGCCAAGCTTGGCAGGCCTGATTGGAGGTGTGGCTCTGCCAATAACCTTAGCTTATCCTTGTTTCATGTGGATAGAGATTAAGAAACCAAGGAAATTTAGCACCACTTGGTACCTAAACTGGACGCTTGGAGCTGTTGGGACGATTCTGAGCGTGCTGGTTGTCATAGGAGCCATTTGGAGCATTGTTGCCAAGGGCATAAAGATCCATTTCTTCAATCCATAG 1485 0.4478 MEEMKISTSASTTTPRETQYSASSSMMSSTKKPLGFLFYMNTSTPLASPMKKAIESIFEEVGRFTKLDSQDDWLPITESRNGNAYYAAFHVLSSGIGFQALVLPLAFTTLGWIWGILCLCVAFTWQLYTLWLLVQLHESDTGVRHSRYIKLAMAAFGEKLGKLLVLFPVQYLSGGTCVTLIMIGGGTMKIFFQTVCGGETLTTIEWYLVFTGAAILLAQLPNLNSMAGVSLIGAITAVAYCSLIWTVSIVQGKLAHVSYEPPKGQSGIFIVWNAFGIAFRGHNLVLEIQGTMPSDAKQPSRVAMWKGTMFAYMVIAFCLFPLAIGGYWSYGNLIPSTGGMLSALHKYHEHDTSTFIIALTSLLVVINSLSSFQLYAMPIFDNLESRYTIKKNRPCPRWLRVVIRVLFGCLAFFIAIAFPFLPSLAGLIGGVALPITLAYPCFMWIEIKKPRKFSTTWYLNWTLGAVGTILSVLVVIGAIWSIVAKGIKIHFFNP* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3454 494 PANTHER OSJNBA0084K11.20 PROTEIN 38 489 - -
Lja1g3454 494 MobiDBLite consensus disorder prediction 1 28 - -
Lja1g3454 494 PANTHER OS05G0424000 PROTEIN-RELATED 38 489 - -
Lja1g3454 494 Pfam Transmembrane amino acid transporter protein 81 482 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3454 Lja-Chr1 43047521 43050963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3454 5 494 Organic Solute Cotransporters AT1G47670 54.274 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3454 - - gmx:100788860 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3454 1 43047521 43050963 Lja1g3454 1 43047521 43050963 ECH