Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3449 ATGGGATGCAACACCTCACGCCTCGATCACCTTCCGGCGGTGGCTCTCTGCCGTGACCGCTGCAAGTTCGCCGACGAAGCACTCCGTCAAAGCTACGCCCTCGCCGACGCACACGTGGCGCATATGGACTCCCTCAGAACCCTTGGCCCCGCTCTCGTTTGCTTCTTCGATCACTTCCAAGAAACCAAAACCGTTTCAATTTTATCATCACCACCGCCGCCGCCGCTGCCAGTAGCAGCACCACCTCACTCTCCGCCACCATGTTCTGATGAATTTCCTCTGCATTCTGAATCCGATGATGATCATGATGCAGATAATGAACCACCTCGTTATGATGATTATCTAAACCACCGCATTTTATCCCCTGCTACGCCGCTTTCTCCGCCGTATAGCGGTGGCTTTTGGGGTTCGAAATCGGCACCGTCGCCGCCTCCTCCGACGAGCTCAGCCTGGGATTTGTTCAATTTCTTCGAGCCTTATCAATTGCCGTACGGTCATAGTGCGAGTTTTGACAACGACTCTACAGAGGAGGAGAAGGAAAATGGCAAAATCGTCATGAGTCACGAGATGACTCAGCAGCAGAAAGGTGATGGTGATGGGTCTGGAATTGAATCCAAAATTGAAGGTAAGGTGAAGAATGATGCAGAAAGTAACAATGGTGAATTGAAGAAAAATGAGACTGATACTGATTCCAAGGAAAAATCGAAAGAGTCAGAGGAATGCTGCAACCAGAAGAAAGGTTTCAGTGAAGCAGTGAAAGAGATTCAGATTCTATTTGCTAGAGCATCGGATTCTGGGAACTCGATTTTGGAAATGCTGGAAGTTGGGAAGCTCCGTTACCATAAACAACTTGATTTCATACCAGTTTCATGCAAGGTGATGCATGTGTTTGCTCTCTCTAATTCCTCATTGGTTGGAGGGAGAAGGAGACCATGTGGGTATGAAGGAGAAGGACTCAGCTATGGGAATCTCTGCTCTACTTTGAAGAAGGTGTGTCTGTGGGAGAAGAAGTTGTATCATGAAGTTAAGGCTGAGGAAAAATTGCGCACACTTCATGAGAAGAAGTGTAGGCAGTTGAGACGCATGCTTAAAAATGATGCTGATGCACACAAAATTGATTCTGTTCAAGCTTTCATTGGGGTTTTAGCTACAAAAATGAAAATCTCTATCCAAGTAGTTGACAAGATATCTATTACGATTAGCAAGTTGACAGAAGAGGAGCTGTGGCCACAGATCAACAGGTTTATTCACATGTTTCTAGGAATGTGGAAAGATATGCAAGAGTGTTACAGATTGGCGTATGAGGAAATTGCTGAAACCAAAACTTCAGAAGCCACTTCATTCAATAAAAAGCTTGGCACTGCCCATATTGATGCAATAATAAAACTCAAATCCGAGGTACAGAAATGGAATTTGAGCTTCTCAGATTGGATTCAGGCCCAGAAATCCTATGTGAAAGCCTTGAATGGTTGGCTAGTACGATGTTTAATGTATGAACCTGAAGAAATACCAGATGATTCACCACCTGTGTATGTGATCTGTAACAAATGGTCACAGGCAGTGGATAATCTCTCAGAGAAGAATGTATTTGAAGCCATAACTGGATTCATGTTCAGAGTGAATGAGCTATTAGAAAAGCATATATTAGACCTCCAGCAAAAGTTAACATTGGACAAGGAACTGGAGAGAAAAGTGAAAGTTTTGAAGAGGCAGGAGCAGAAAATGCACAAGGTGGTTTCAGTTGCAAGAGAAGAAACTGTGCATCATGGTGATGTTGTTGATATGATCAGCCTTCAATCAGGACTGAAAGAGATCTTTGTTGCCTTGGATAGGTTCACTGCTACCACTGCTGGCGTATATGAAGAACTTAGCCAGCAAATGAAGCAAGAGAACCCTGTTTTGGGAGAATCCAGCAAAATTCAATAG 1926 0.4429 MGCNTSRLDHLPAVALCRDRCKFADEALRQSYALADAHVAHMDSLRTLGPALVCFFDHFQETKTVSILSSPPPPPLPVAAPPHSPPPCSDEFPLHSESDDDHDADNEPPRYDDYLNHRILSPATPLSPPYSGGFWGSKSAPSPPPPTSSAWDLFNFFEPYQLPYGHSASFDNDSTEEEKENGKIVMSHEMTQQQKGDGDGSGIESKIEGKVKNDAESNNGELKKNETDTDSKEKSKESEECCNQKKGFSEAVKEIQILFARASDSGNSILEMLEVGKLRYHKQLDFIPVSCKVMHVFALSNSSLVGGRRRPCGYEGEGLSYGNLCSTLKKVCLWEKKLYHEVKAEEKLRTLHEKKCRQLRRMLKNDADAHKIDSVQAFIGVLATKMKISIQVVDKISITISKLTEEELWPQINRFIHMFLGMWKDMQECYRLAYEEIAETKTSEATSFNKKLGTAHIDAIIKLKSEVQKWNLSFSDWIQAQKSYVKALNGWLVRCLMYEPEEIPDDSPPVYVICNKWSQAVDNLSEKNVFEAITGFMFRVNELLEKHILDLQQKLTLDKELERKVKVLKRQEQKMHKVVSVAREETVHHGDVVDMISLQSGLKEIFVALDRFTATTAGVYEELSQQMKQENPVLGESSKIQ* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3449 641 MobiDBLite consensus disorder prediction 93 112 - -
Lja1g3449 641 MobiDBLite consensus disorder prediction 167 240 - -
Lja1g3449 641 MobiDBLite consensus disorder prediction 68 89 - -
Lja1g3449 641 MobiDBLite consensus disorder prediction 171 185 - -
Lja1g3449 641 PANTHER F5M15.15 1 633 - -
Lja1g3449 641 PANTHER UNCHARACTERIZED 1 633 - -
Lja1g3449 641 MobiDBLite consensus disorder prediction 201 240 - -
Lja1g3449 641 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
Lja1g3449 641 Coils Coil 551 571 - -
Lja1g3449 641 MobiDBLite consensus disorder prediction 66 112 - -
Lja1g3449 641 Pfam Protein of unknown function (DUF632) 249 541 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3449 Lja-Chr1 43019806 43023017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3449 1 625 Acyl Lipid Metabolism Gene Families AT2G27090 25.134 3.37e-43 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3449 - - lja:Lj1g3v2268470.1 1234.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3449 1 43019806 43023017 Lja1g3449 1 43019806 43023017 ECH