Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3446 ATGCCATTTACCAAACGAGTTTCAGATTTTGATTGGCGATTCGTCGTGTTGATAATTTTTCCAGTTTCTCTGGTTATTTTCTTCTCTTTCAATTTAAACACCTTTTCATCTTTTTACCCGGTTCAGAATTTTCTCTTCAACCTTCCTTTTGGTGGTGGCGGTGGTGTTCGGAAAGATGAGTTGCTCCGGTCGAGAATGGCAGTGTGTTTGGTCGGCGGTGCGCGGAGGTTCGAACTCACCGGACCTTCCATAATACAGAATATACTCAAGGAGTACCCGAATTCAGATCTCTTCCTGCATAGTCCGTTAGACAATGACGCATTCAAATTCTCGCTGTTGAAGTCTGCGCCGAACGTCGCCGCCGTGAGAATCTTCCACCCTCAGCCGTTGCCGGAGAACGAGTCGTATGCTCGAGTCCTCACGGCGCATAACTCGCCCAATGGCATCCAGGGACTTATTCAATATTTTAACCTCGTGGAAGGATGCTTAACCATGATAAAATCACATCAAGAGAGAAACAACTTCACGTACGATTGGATAATCAGAACTCGAGTAGATGGGTATTGGAATGCTCCATTGAGACCTGAAAACTTTGTTCCGAGTCAGTACCTGGTCCCATCCGGATCCTCATACGGTGGACTCAACGATCGTTTAGGAATTGGCGACCTTAGAACTTCAACGGTGGCCATGTCACGACTCTCTCTCATTCCCGCTTTAGACTCTGCCGATTTCACGGAGCTCAACTCCGAAGCAGCCTTCAAAGCCCAACTCACCACGCAGAAGGTGAGCTACCTCACAAACCGCCTCCCTTTTTGCATCGTCTCGGACCGGAGCTACGATTTCCCGCCGGGCCAGTATGGCGTGCCGGTGGCGGCGCTGTCGAGCCCCGGTCCGCTGAGCGGAGCAAAGTGTCGGCCGTGCAGGCCAGTTTGTACGGGCAAATGCGTGGAGGAGGTGATGGTGGTGGTTGAGAAGGGGTGGAGTTGGACCGATTGGGGCGGCGGGGCACTTGAGCTTTGCAATGCTCATGAAAGCTGGGAAAACGGTTGGGAGAAGATTTTTGATAGTGTTGCCGGAAAGAAATTTGCGGCGACTAGGAAGCGAGTTCACTCTATGAAATTTGATGAATGCGTTAATGATTTTAACGAGTTCAGAAAACATGCTACTTATTGGGATGCACCTTCTGTAGAAGAAATTTGTACATTAGGTTTGAAACGAAATTAG 1224 0.4902 MPFTKRVSDFDWRFVVLIIFPVSLVIFFSFNLNTFSSFYPVQNFLFNLPFGGGGGVRKDELLRSRMAVCLVGGARRFELTGPSIIQNILKEYPNSDLFLHSPLDNDAFKFSLLKSAPNVAAVRIFHPQPLPENESYARVLTAHNSPNGIQGLIQYFNLVEGCLTMIKSHQERNNFTYDWIIRTRVDGYWNAPLRPENFVPSQYLVPSGSSYGGLNDRLGIGDLRTSTVAMSRLSLIPALDSADFTELNSEAAFKAQLTTQKVSYLTNRLPFCIVSDRSYDFPPGQYGVPVAALSSPGPLSGAKCRPCRPVCTGKCVEEVMVVVEKGWSWTDWGGGALELCNAHESWENGWEKIFDSVAGKKFAATRKRVHSMKFDECVNDFNEFRKHATYWDAPSVEEICTLGLKRN* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3446 407 PANTHER OS08G0360500 PROTEIN 5 405 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3446 1 407 EF-hand Containing Proteins AT1G76250 57.373 8.44e-177 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3446 - - gmx:100814333 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3446 1 42975413 42977996 Lja1g3446 1 42975413 42977996 ECH