Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3442 ATGATCATGTATTTGTTGACAGGGAAACCCTCCTTCACACCCAAATTGGTGCTGTCTTCTTCTTCTTCAACTTCATCTTCATCGTCATCTTCAATTTCCATCGTTTCATTCCGAACTCGTTCAACCACATCGATTAGTTTTCCCAGAAATTCAAACCGTAAAGGAAGATTTCCATTGAGGGTTGAAGCTTATGATTCCTCCACCAACCCTGCTGGAGATTCCAATTCCAAACCCCCTAACGGCACTCTCTCAAAGAGCAGGAGAGAGATTTTGCTGGAATATGTTAAGAATGTGCAGCCGGAATTTATGGAAATGTTTGTGAAAAGAGCACCTCAACAGGTTGTGGATGCTATGCGGCAAACAGTGACAAATATGATTGGAACACTCCCCCCTCAATTTTTTGCTGTCACAATTACCACTGTAGCTGAAAACCTTGCACAGCTCATGTACAGTGTCATGATGACTGGATACATGTTCAAGAATGCACAATACCGTTTGGAATTGCAAGAAGGTTTGGAACAGGTTGCCCTTCCTGATGTGCAAGATAAAAAGGATAAGCCAGATTATGCACCTGGGACACAAAAGAATGTTTCAGGTGAAGTCCTTCGGTGGAACCATGTTTCTGGACCTGAAAGAATAGATGCTAAAAAGTATATTGAATTACTTGAAGTGGAGATTGAGGAGCTGAATCGTCAAGTTGGAAGACAATCTAGCAATGCACAAAATGAACTGTTGGAATACCTAAAATCTCTTGAGCCTCGGAACTTGAAGGACTTGACTAGTAGTGCTGGGGAGGACGTTGTGCTTGCAATGAATACATTTATAAAGCGCCTACTGGCTGTTGCAGATCCTAGTCAAATGAAGACTAGCGTGACTGAGACTAGTGCAACTGAACTTAGCAAACTTCTTTATTGGTTGATGGTGGTCGGGTACAGCATTCGCAATATTGAAGTTCGTTATGACATGGAAAGAGTACTTGGTACTCCTCCAAAGCTGGCTGAATTGCCACCAGGTGAAAATGTTTAA 1026 0.422 MIMYLLTGKPSFTPKLVLSSSSSTSSSSSSSISIVSFRTRSTTSISFPRNSNRKGRFPLRVEAYDSSTNPAGDSNSKPPNGTLSKSRREILLEYVKNVQPEFMEMFVKRAPQQVVDAMRQTVTNMIGTLPPQFFAVTITTVAENLAQLMYSVMMTGYMFKNAQYRLELQEGLEQVALPDVQDKKDKPDYAPGTQKNVSGEVLRWNHVSGPERIDAKKYIELLEVEIEELNRQVGRQSSNAQNELLEYLKSLEPRNLKDLTSSAGEDVVLAMNTFIKRLLAVADPSQMKTSVTETSATELSKLLYWLMVVGYSIRNIEVRYDMERVLGTPPKLAELPPGENV* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3442 341 MobiDBLite consensus disorder prediction 67 83 - -
Lja1g3442 341 PANTHER OS02G0833400 PROTEIN 20 340 - -
Lja1g3442 341 Pfam Protein of unknown function (DUF760) 91 170 IPR008479 -
Lja1g3442 341 Pfam Protein of unknown function (DUF760) 243 326 IPR008479 -
Lja1g3442 341 Coils Coil 212 239 - -
Lja1g3442 341 MobiDBLite consensus disorder prediction 64 83 - -
Lja1g3442 341 PANTHER OS02G0833400 PROTEIN 20 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3442 Lja-Chr1 42945426 42949074 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3442 - - gmx:100815202 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3442 1 42945426 42949074 Lja1g3442 1 42945426 42949074 ECH