Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3439 ATGGCGGATCTTCTTTCTCTCTCATGTTTTCTCTTCTTCTCAATCTTCCTCCACTCTCTTCATCTTCATCTTCATGTTCATGGCGAATCAAACAATCAAACTTCCATCACGCAAATCAACCACGATCTCTACCATTCCAGTGACAATTTGATGGAGGAGATTAGGGCCTTGGTCCATCGTCATTCGGATAAACTCACTGTGGAGACACTTAGAGCTGGAAACAAAGGATATGGCGCTGAGGTTCCGGTGGTTACTTATTGCAAGCGGAAAAAAGAGAATGATGAGAGATTGAAGCTTCGGATACTTCTTAGTTTTGGGCAGCATGGAAGGGAGCTGATTACCACAGAACTTGCTTTAAGGATTTTGTCTATTCTAAGTGAAGAACAATTTCTACCCGGCATGGATCAAGCTTCCTTAAACAGTACACTTGACAAGCTAGTCATAAAAGTAGTTCCGATGGAAAACTGGAATGGCCGCAAACTTGTTGAGGCTGGAGATCTTTGCGAGAGAAGAAATGGCAGAGGAGTTGATCTCAACCGGAACTGGAGTGTAGACTGGGGAAAAAAGGAGAAGGATTATGATCCTTATGAGGAGAATCCTGGACTCGCTCCATTTAGCGAGCCTGAAAGTCAACTTATGCGGAATCTTGCGATATCTTTTCAACCGCATATATGGGTCAATGTGCACTCTGGAATGGAAGCTCTTTTTATGCCATATGATCATAAAAATAGAACACCTGATGGGTTGCCATTGCAACGGATGAAGTTGTTGCTTGAAGAAGTAAACCAGCTTCATTGCCAAAAGCGTTGCATGATTGGGTCTGGAGGCGGTTCCGTAGGGTATTTTGCTCACGGGACTGCAACAGATTTCATGTACGACATCGTGAGGGTTCCCATGGCTTTCACATTTGAGATATACGGAGATGGAACAGCCTCATCAAAAGACTGTTTTAAAATGTTTAATCCAGTTGACCTTGCTAGCTACAACAGAGTTCTCAGTGACTGGTCTGCAGCATTCTTTACGATTTTTAAATTGGCACCACTTCAGCTTGGTGAGTCTGTCTTGAAGTTGGATAAGTTGGTATCAATAGATGAATATCTAGATGGGTATTTGATGGAGAGGAGAAATAGATACGGAAAAAAGATAGAGGTGCTTGAGCTTGGAATGCAAGAAATAAGAACGTATTTCAGGCTCTTTTTACTATCTTCAGTTTTACTATTGTTCATGTTTTGTTCTAGAATTTCAAAAAGTAAGTGTAGACCAATTGTTGCTGCTATGCCCCTATAA 1287 0.4172 MADLLSLSCFLFFSIFLHSLHLHLHVHGESNNQTSITQINHDLYHSSDNLMEEIRALVHRHSDKLTVETLRAGNKGYGAEVPVVTYCKRKKENDERLKLRILLSFGQHGRELITTELALRILSILSEEQFLPGMDQASLNSTLDKLVIKVVPMENWNGRKLVEAGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGLAPFSEPESQLMRNLAISFQPHIWVNVHSGMEALFMPYDHKNRTPDGLPLQRMKLLLEEVNQLHCQKRCMIGSGGGSVGYFAHGTATDFMYDIVRVPMAFTFEIYGDGTASSKDCFKMFNPVDLASYNRVLSDWSAAFFTIFKLAPLQLGESVLKLDKLVSIDEYLDGYLMERRNRYGKKIEVLELGMQEIRTYFRLFLLSSVLLLFMFCSRISKSKCRPIVAAMPL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3439 428 PANTHER OS02G0119300 PROTEIN 11 426 - -
Lja1g3439 428 Pfam Zinc carboxypeptidase 57 317 IPR000834 GO:0004181|GO:0006508|GO:0008270
Lja1g3439 428 PANTHER PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B 11 426 - -
Lja1g3439 428 SMART zn_carb 44 315 IPR000834 GO:0004181|GO:0006508|GO:0008270
Lja1g3439 428 CDD M14-CPA-like 98 320 IPR034269 -
Lja1g3439 428 Gene3D Zn peptidases 40 323 - -
Lja1g3439 428 SUPERFAMILY Zn-dependent exopeptidases 40 346 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3439 - - gmx:100813842 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3439 1 42905674 42909422 Lja1g3439 1 42905674 42909422 ECH