Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3405 ATGGTGATGAAGGAGAGAGATGAGGAACTCAGTCTGTTCCTTGAGATGAGGAGGAGGGAGAAAGAAAATGAGAAAAATAACCTTCTTCTTCAAAACTCTGAGGAACTTGATTTGTCCAATTTGGAATCCAATCGTGGAAGCTCTATGATTTCCAAAACCATGATTTTAGTGCCACCAAGGAAGACTGGGGTTGAAGTGTTTTTGAATTCAGAGAATGGCAAGTCTGAATATGAATGGCTTCTTACGCCACCGGATTCCCCTCGTTTTCCAACTTTAGAGAAGCAGTCACAGATATCAGCAAAGAACGATATGGAAACTCGCAATGCCCGTCCAACAGCTTTAAAACCTAGGGTCGCTAATATCCAAGCAGAACCAGCTGCAAGAAGCAATGCAGTTTCAAAGAATCATGCAGCAGTAACAGGACTCAGTTCTTGCACTAATGGTGGTAGGAGACCTTCATCATCGAGATCTTCAACCCCATCTGGAAGACCAACATTACCTTCAACAACCAGATCCTCTAGGCCCTCTACACCTACCTCCCGGGCCACCTTACCTTCTGCGAAATCAATAGCTCCACCAGTGAGATCATCCACTCCTACTAGATCCACATCTCGGGCCTCAACACCTACTTCAAGGACATCTCAAAGATCAGCAACTCCAACCCTCCGATCATCAACCCCAACAAGAACATTTAGAGTATCTGCTCCTCCTACGCGACCTTCATCCGCATCAAAGGCACGCCCCATTGTTGCTAAGAATCCGGCGCAATCACGCGGCATCTCTCCATCAGTAAAATCTAGACCCTGGGAACCATCACAAATGCCTGGTTATTCTCTTGAAGCTCCTCCAAATTTGAAGACATCATTGCCAGAAAGACCAGCTTCAGCCACTAGGAGTAGGCCTGGAGCACAAAACACTAGATCATCTTCTGTTGAGGCGAGTAGCAGTGGAAAATCTAGAAGGCAGTCCAGCACGCCTTCGAAAGGACGGGCTTCGACTGGGTTTGCCCTTCTTAATTATAGCTCCATGCAAGCTTTGAGTAGAGCTCGTTTCACTGATGGTGATCATGACAGCCCTGGTGAAGTTGGGACTAAAATGGTTGAAAGAGTAGTAAACATGAGAAAACTAGCACCCCCAAAACGTGAAGACCATCATTCTTCCCATAACAACTCCAATGGGAAATCTTCATCATCTGGTAGCTCTGGATTCGGATGTACACTTTCAAAGACATCTTTAGATATGGCTAAGAGGCATATGGACATAAGGCGAAGCATCCAGGGTAATTTGCGCCCAGTCGTGACAAACATTCCAGCTTCCTCTACGTACAATGTGAGATCAGCTAGTGCCTCAAAGAGCAGGACTATCAGTGTTTCTGATTCCCCACTTGCCACAAGCAGCACTGCTAGCTCTGAACCCAGCGTGAATAATAATTCCCCATCTTATGATGGAAGTGAGATTGGAGAAAATGATTTTGGAAGTGAGAGGGGAAACTCTTCCCCTATGAGTCACCATAGCTAG 1518 0.4592 MVMKERDEELSLFLEMRRREKENEKNNLLLQNSEELDLSNLESNRGSSMISKTMILVPPRKTGVEVFLNSENGKSEYEWLLTPPDSPRFPTLEKQSQISAKNDMETRNARPTALKPRVANIQAEPAARSNAVSKNHAAVTGLSSCTNGGRRPSSSRSSTPSGRPTLPSTTRSSRPSTPTSRATLPSAKSIAPPVRSSTPTRSTSRASTPTSRTSQRSATPTLRSSTPTRTFRVSAPPTRPSSASKARPIVAKNPAQSRGISPSVKSRPWEPSQMPGYSLEAPPNLKTSLPERPASATRSRPGAQNTRSSSVEASSSGKSRRQSSTPSKGRASTGFALLNYSSMQALSRARFTDGDHDSPGEVGTKMVERVVNMRKLAPPKREDHHSSHNNSNGKSSSSGSSGFGCTLSKTSLDMAKRHMDIRRSIQGNLRPVVTNIPASSTYNVRSASASKSRTISVSDSPLATSSTASSEPSVNNNSPSYDGSEIGENDFGSERGNSSPMSHHS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3405 505 MobiDBLite consensus disorder prediction 491 505 - -
Lja1g3405 505 MobiDBLite consensus disorder prediction 141 241 - -
Lja1g3405 505 MobiDBLite consensus disorder prediction 378 404 - -
Lja1g3405 505 PANTHER GASTRIC MUCIN-LIKE PROTEIN 1 505 - -
Lja1g3405 505 PANTHER GPI-ANCHORED PROTEIN PB15E9.01C-RELATED 1 505 - -
Lja1g3405 505 MobiDBLite consensus disorder prediction 443 484 - -
Lja1g3405 505 MobiDBLite consensus disorder prediction 443 505 - -
Lja1g3405 505 MobiDBLite consensus disorder prediction 290 335 - -
Lja1g3405 505 MobiDBLite consensus disorder prediction 141 335 - -
Lja1g3405 505 MobiDBLite consensus disorder prediction 86 120 - -
Lja1g3405 505 MobiDBLite consensus disorder prediction 89 106 - -
Lja1g3405 505 MobiDBLite consensus disorder prediction 390 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3405 Lja-Chr1 42432713 42436671 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3405 - - aprc:113863389 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3405 1 42432713 42436671 Lja1g3405 1 42432713 42436671 ECH
Lja6g0433 6 10523970 10527960 Lja1g3405 1 42432713 42436671 ECH