Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja1g3403 | ATGGGAAGACTTTTCTTGATCAATCTTGATGGAAACTTCTATAGATGCAAGCACTGCGAAACACATTTTGCTCTTGTTGATGATATCATTTCCAAGTCTTTCCATTGCAGGCATGGGAAGGCTTATCTTTTTGATAAAGTTGTGAATATCACCGTTGGCGTGAAAGAAGAACGGATGATGATCACAGGATTGCACACTGTGGTTGACATATTCTGTGTTGCATGCGGTTCCATTGTTGGATGGAAATATGAGGCTGCTTATGAGACGACTGAGAAGTACAAAGAAGGAAAGTTTATCCTTGAAAGGTTTAAGGTGTTGGGACCTGATGGCAGCCTCTACTTGACAGCTCAAGAAGCTCATGTTGCTGAAAGTGATGCTGATGATGTTTGA | 390 | 0.4128 | MGRLFLINLDGNFYRCKHCETHFALVDDIISKSFHCRHGKAYLFDKVVNITVGVKEERMMITGLHTVVDIFCVACGSIVGWKYEAAYETTEKYKEGKFILERFKVLGPDGSLYLTAQEAHVAESDADDV* | 130 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja1g3403 | 129 | Pfam | Yippee zinc-binding/DNA-binding /Mis18, centromere assembly | 14 | 104 | IPR004910 | - | |
| Lja1g3403 | 129 | ProSiteProfiles | Yippee domain profile. | 12 | 109 | IPR034751 | - | |
| Lja1g3403 | 129 | PANTHER | PROTEIN YIPPEE-LIKE | 1 | 125 | - | - | |
| Lja1g3403 | 129 | PANTHER | PROTEIN YIPPEE-LIKE CG15309-RELATED | 1 | 125 | IPR039058 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja1g3403 | Lja-Chr1 | 42425155 | 42427966 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja1g3403 | - | - | gmx:100817752 | 227.639 |
Event-related genes