Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3232 ATGATGAATGGTAGGAATGGGAGGGAGTCTCTGCTTGGATCCCTCAACCACCACCACAGAAGAAACCACACCTTCAATAATGGTGGCGGTGTCGCCACCAACAATGAAGAAAACCTCGATCTCTTCTCCAACAACCGCCGTTCTCTCTCTCTGGCTTCTTCTGATGACTCTTCTGACGTTTCTGTGAAATTGGGGAGGCTCTCACTTGGGGCGGCGAAACCGGCGAGAAGTGGGATGGAAGATCTGTTATCATCTGCAGAAGGAGGAAAGCATGATTATGACTGGCTTCTCACTCCCCCGGGGACTCCTGTTTTTCCTACATCAGAAGGTGAATCCCAATCAACGATAGTGCCTCCAAGAAGAAGTATGAGTAGATCAACTTCTACCACTAAGGCCTCGAGGCTTTCGGTCTCGCAATCAGAGAGCAACAATCACTCTAGACCAGCAAGAAGCAGTTCTGTGACTCGCCCTTCCATCTCCAGCTCACAGTCACAATACAACACTTATTCTTCAAACAGATCCCCCTCCTCAATCCTCAACACAAGCTCTGCCTCAGTTTCATCTTACATCAGACCATCTTCTCCTGTAACCCGCTCTACATCTTCAGCAAGGCCTTCCACTCCCTCCTCCCGCTCCACACCATCACGATCCTCAACACCCTCTAGAGCACGCTCAGTTTCCACCACCACCTCCTCCGCTGACAAACACAGACCATCATCACAAAGCTCTAGGCCATCCACTCCTAGTTCTTCTAGGCCTCAGATTCCTGCAAATTTACATTCCCCATCTGCACCTCCGACTCGGTCACTGTCCCGCCCTTCAACTCCCACTCGTAGGAGCTCATTGCCATCTCCATCTTCATCTCCTTCCCTCACAACAGGCTCTTTAGCTTCAGCTGGACGTGTTCCATTGAGTGGTCGCAGTTCAGCACCATCATCAAGGCCAAGCTCACCAAGCCCGCGAGTCCGGCCCCCACCACAGCCAGTTGTTCCATCTGATTTCCCCCATGATACGCCACCTAACCTTAGAACAACATTGCCTGATAGACCTCTCTCTGCAGGCAGGTCCCGTCCCGGTGCTTCCACTTTAAAGGGGAACCATTCCGATCTTCAAGCCTCAGTTAATATGCCGAGGCGACCTTCATCTCCTGTTGTCAGTAGGGGGAGGTCCACAGAACCTGCCAGCAAAAGCCGTGGCTATGCCAATGGCCACCATGCTGATGTTCATGAACCAAGGAGAGTTCCACATGCTCCTGAAGGAGTTTCAAGGAAACCTGTTAAGGCCTCAACCACTACCAGTGACAACTCCGGATTTGGAAGGACAATCTCAAAGAAATCATTGGATATGGCTATTAAGCACATGGATATAAGGAACAGCTCAGGTAATGTTCGCTCACTATCAAGCACCACACTCTTTCCCCAGAGTATTCGGAATTCCACTTCCAAGAGCCAGTCTCACAGAGTTTCAAGTGCTCCAGCGTCTTATGACATGAATGGAAGCCATTTAACCCATAACAATGGAGCTAATTTCGATGCGAGAAACGGTGCGAATAGAACTATGACAAGAGGAAGAGAGGTAGATCAAAGACAATACTCAGCAAAACTCAGTGAAGTGGACATCTATGAGAGTTCTCGTTACGACGCGCTATTGCTTAAAGAAGATTTGAAGAACACAAACTGGCTGCATAGTGCTGATGATAAATGTGACGAAGCTTCCATATTTGATAACGGATTTGAGCACCTCCCGGAACCTTTTGGTCTCCTATAG 1767 0.4924 MMNGRNGRESLLGSLNHHHRRNHTFNNGGGVATNNEENLDLFSNNRRSLSLASSDDSSDVSVKLGRLSLGAAKPARSGMEDLLSSAEGGKHDYDWLLTPPGTPVFPTSEGESQSTIVPPRRSMSRSTSTTKASRLSVSQSESNNHSRPARSSSVTRPSISSSQSQYNTYSSNRSPSSILNTSSASVSSYIRPSSPVTRSTSSARPSTPSSRSTPSRSSTPSRARSVSTTTSSADKHRPSSQSSRPSTPSSSRPQIPANLHSPSAPPTRSLSRPSTPTRRSSLPSPSSSPSLTTGSLASAGRVPLSGRSSAPSSRPSSPSPRVRPPPQPVVPSDFPHDTPPNLRTTLPDRPLSAGRSRPGASTLKGNHSDLQASVNMPRRPSSPVVSRGRSTEPASKSRGYANGHHADVHEPRRVPHAPEGVSRKPVKASTTTSDNSGFGRTISKKSLDMAIKHMDIRNSSGNVRSLSSTTLFPQSIRNSTSKSQSHRVSSAPASYDMNGSHLTHNNGANFDARNGANRTMTRGREVDQRQYSAKLSEVDIYESSRYDALLLKEDLKNTNWLHSADDKCDEASIFDNGFEHLPEPFGLL* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3232 588 MobiDBLite consensus disorder prediction 359 397 - -
Lja1g3232 588 MobiDBLite consensus disorder prediction 105 299 - -
Lja1g3232 588 PANTHER GASTRIC MUCIN-LIKE PROTEIN 17 588 - -
Lja1g3232 588 MobiDBLite consensus disorder prediction 402 420 - -
Lja1g3232 588 MobiDBLite consensus disorder prediction 425 441 - -
Lja1g3232 588 MobiDBLite consensus disorder prediction 93 441 - -
Lja1g3232 588 MobiDBLite consensus disorder prediction 317 335 - -
Lja1g3232 588 MobiDBLite consensus disorder prediction 476 515 - -
Lja1g3232 588 PANTHER GASTRIC MUCIN-LIKE PROTEIN 17 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3232 Lja-Chr1 39921321 39925226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3232 - - gmx:100797203 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3232 1 39921321 39925226 Lja1g3232 1 39921321 39925226 ECH
Lja1g3232 1 39921321 39925226 Lja3g4781 3 89856189 89859072 PCT