Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3220 ATGAAGCTTAATCTTCTTCTTCCAAGCCTAGTGATGCTTGTTCTTGTTCTTCTTCTGTGTTTTGAATCACTTCCTCATATAAGGGCTCAATCCACTACTTCTTCAGCAAAGGCCTTGGATGCAGTTCTGCAGCAATATGCTTACAAGGTTTTGGTGAATCCAAAAACAGGTACTATTTACAATGCAACTCAACTTCCATCCAATTTGACTGGGATTGAAGTTTCAGCATTGAGATTAAGGAGTGGCAGTTTGAAGAGAAAAGGGTTCAAGATGTACAATGAATTTGAAATCCCTCAGGGACTCATAGTGAGCACCTATGTAGAAAGACTGGTTTTGGTGTATCAAAATCTGGGAAAATTTTCCACCAGGTACTATCCATTGGCTAATCACACATACTTGACTCCAGTGCTAGGGCTGCTAGTTTATGATAGTTCGAATTTGTCGGCTACGAATTTATCAGAACTGGATATAAGTGCTTCTGGTGACCCCATTTTGGTCAAGTTCAGGAATGTAAAACCAGCTCCTCATGGTGCTGTTGCAGAATGTGTTTGGTTTGATTTGAAGGGTTCTTCCAGTTTCAGCATTGTAACAGGAGGCAACACATGTTCTACTTCTCAACAGGGTCATTTCTCAATAGTGGTCAAATCCACTACTCCTCCAGCACCACCAGTACCAAGTGCTCATGGAGGTAAGAAGAAGAGTGGAAAAGTGTGGATTATTGTTGGTTCTATCATTGGAGGACTAGCATTGCTGGTTTTGTTGTTGTTTCTAGCTTTGTGGATGAACAAGTGTACAAAAAAGAAGAAAATGCAAAGGATGGAAAGGGTTGCTGAATTGGGAGAACCTCTTCAAATGGCCTCAGTTGGGGATACAAAAGCACCTGCTGCAACAGTTACAAGAACACAACCAACCCTTGAACATGAATATGCACCGTGA 936 0.4135 MKLNLLLPSLVMLVLVLLLCFESLPHIRAQSTTSSAKALDAVLQQYAYKVLVNPKTGTIYNATQLPSNLTGIEVSALRLRSGSLKRKGFKMYNEFEIPQGLIVSTYVERLVLVYQNLGKFSTRYYPLANHTYLTPVLGLLVYDSSNLSATNLSELDISASGDPILVKFRNVKPAPHGAVAECVWFDLKGSSSFSIVTGGNTCSTSQQGHFSIVVKSTTPPAPPVPSAHGGKKKSGKVWIIVGSIIGGLALLVLLLFLALWMNKCTKKKKMQRMERVAELGEPLQMASVGDTKAPAATVTRTQPTLEHEYAP* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3220 311 PANTHER EXPRESSED PROTEIN 10 311 - -
Lja1g3220 311 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 10 311 IPR010605 -
Lja1g3220 311 Pfam Protein of unknown function (DUF1191) 34 215 IPR010605 -
Lja1g3220 311 Gene3D - 227 278 - -
Lja1g3220 311 MobiDBLite consensus disorder prediction 290 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3220 Lja-Chr1 39792359 39793659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3220 - - gmx:100808700 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3220 1 39792359 39793659 Lja1g3220 1 39792359 39793659 ECH
Lja1g3220 1 39792359 39793659 Lja3g4775 3 89811577 89813717 PCT