Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3218 ATGGCATATAGGAGAAGACAAGGAATAACAAGAGCCTCAACCTTCAAGGAAGAATTTCATTCATCATTGGATAATAATGATAATGTTAAGGATTCTTCTGTTCATCATGAGAAAAATGCTTCTGCTCCACCTTTCTTATCTTCCTCTTCATTTTCATCATCATCACCATCTTCATCCTTGGCTGCTCAAGCAATCAAAGCCTCCGCCGCTGCTCGGCGCGAACCGTCTCTTTCCTTTGCTTTTGCCCCCTCCTATGATGCTGATCATCAAAGATCCAAGAACTTCCCTTCACAATTCAAGCCACTATATGAACCCCCTGACTCCAATAAAATGATGGAAAATCCCACATTTCGGAAGGGCTTGGATAGAATCACTACTTCTCTCAATCAACTAGGTGACACCTTTGAGAAAGCTTTTGAGGAAGGTCGAACAATGGTGGAGAGTAAGACAGCAGACCTGAGAACTCAAATCAGGCGAAAAGGAAATGTCCCGGAGGACACAAACCTTGCTTCAGAGATGAGGAATCCATGGCAGCAACCAGCTCAGACACAGAATCCATCCAGACAGGAAACACAACTCAAGGCATCTCGAGACGTGGCGATGGCAACAGCTGCTAAAGCGAAACTACTACTTCGTGAGCTAAAAACAGTTAAAGCAGATCTTGCTTTCGCTAAAGCACGGTGTGCTCAACTTGAAGAAGAAAATAAATTACTCAGGGACCGAGAGGGAAGCGAGAAGGGACAAAACCGTGAAGATGATGATCTGATCCGGCTTCAACTGGAGACACTTCTTGCTGAGAAGGCTCGTTTGGCGAATGAGAACGAGACATATTCTCGGGAAAACCGTTTCCTGAGAGAGGTTGTGGAGTATCATCAGCTGACTATGCAGGATGTGGTATATCTAGATGAGGGCATGGAAGAAGTCACAGAAGTTTACCCTGTAGATTCCAATGGGCTACACCAGATATTATCTGTGTCTTCACACTCATCGTCACCGCCAACTCCCGATGAGGTTGTTCTTGGCTCAACAAGTCCACGTATGCTATCAAAAGGGATGTTTCCTGTGCCAGAAGAAGATGATGATGATAAGAGTACATCAGAAGATGAAGCTCCTCATCGTACCTCAGTTTCTAAGCATGCAAAATGA 1146 0.4468 MAYRRRQGITRASTFKEEFHSSLDNNDNVKDSSVHHEKNASAPPFLSSSSFSSSSPSSSLAAQAIKASAAARREPSLSFAFAPSYDADHQRSKNFPSQFKPLYEPPDSNKMMENPTFRKGLDRITTSLNQLGDTFEKAFEEGRTMVESKTADLRTQIRRKGNVPEDTNLASEMRNPWQQPAQTQNPSRQETQLKASRDVAMATAAKAKLLLRELKTVKADLAFAKARCAQLEEENKLLRDREGSEKGQNREDDDLIRLQLETLLAEKARLANENETYSRENRFLREVVEYHQLTMQDVVYLDEGMEEVTEVYPVDSNGLHQILSVSSHSSSPPTPDEVVLGSTSPRMLSKGMFPVPEEDDDDKSTSEDEAPHRTSVSKHAK* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3218 381 MobiDBLite consensus disorder prediction 366 381 - -
Lja1g3218 381 MobiDBLite consensus disorder prediction 324 381 - -
Lja1g3218 381 PANTHER - 98 381 - -
Lja1g3218 381 PANTHER - 1 96 - -
Lja1g3218 381 MobiDBLite consensus disorder prediction 42 58 - -
Lja1g3218 381 MobiDBLite consensus disorder prediction 324 338 - -
Lja1g3218 381 MobiDBLite consensus disorder prediction 10 37 - -
Lja1g3218 381 MobiDBLite consensus disorder prediction 1 58 - -
Lja1g3218 381 MobiDBLite consensus disorder prediction 162 192 - -
Lja1g3218 381 Coils Coil 260 287 - -
Lja1g3218 381 Coils Coil 207 241 - -
Lja1g3218 381 MobiDBLite consensus disorder prediction 168 192 - -
Lja1g3218 381 PANTHER UNCHARACTERIZED 98 381 - -
Lja1g3218 381 PANTHER UNCHARACTERIZED 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3218 Lja-Chr1 39769950 39774413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3218 - - gmx:100819083 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3218 1 39769950 39774413 Lja1g3218 1 39769950 39774413 ECH
Lja1g3218 1 39769950 39774413 Lja3g4774 3 89803862 89806369 PCT