Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3040 ATGTTCGGCAGAAAAGTATTTCTAACCTACAAAAGGAAGCGACAATCTCAAAGTAGTAGTTTTATCCAAGGTAATTGCTGCCAAACTTCAGTTTGTGAAGAGGCCTGCGATTGTTCTTTATCTACACCAGTTAAACATGACAAGCTAACTGCTGAGAAGGCATCAGAAAAGGATGAAGAAAAACCAATGGATACCAGTGACGGGGAAAATCCGTGCTTTGAATGTGCCAAACAGCCAGACTGTTCATCATCATTTACCATTCAAAAGCCTGATGACCTTAGGGCAGGGGAGCGTGGAATTAGTGACGCTACAGAAAGTATAGTTTCTAAACAGAAATCTCTTGCAACAAGAATTCCATGCGAGGATAACTCGAAAAAGGATTTTGGTGAATCACCCCCAGTAGAAAAGGCACAGAATGGTTGTGACACTCAAAGAAATTCTCATGCCAGTGAAAGCTCTGGTAATGAATTTGACAATTGTTCTAATAAAACAATTATTTCCCCGCCAGTTGAAATGGATGCTGGGAATGATCTCAATTTTATCAACTCAGAAACACCCATTGCAAGGGAATTCCATTCTGCACGTAGTGATGAGTCTCCTGCTTTGAATATTCCAATGGAAGATAATTCACCCTCCAAAGATAATTTCAGGAACCCATCTGGACAAATAGTAACGCAGACCAACTTGACCAGTCCATTAATAACCTTCTATCGACGCTATAAAAGAAAAGAATGTATGGATGGGACTGATAGGAAAAGCAAGTTGCTCAAGAAGGAAAATATTTCAGTGCTGACCAAGTGGAGCAAGCTTGCAAATGCAAATGGTAATTTCTCTTCTTGCGAGGAATCATCGTGTGATGAATGTCCTGTGGATAAGGTACCGGACCTTAACCAATCAGTGGAGCTTTCAGAAAGAGGGAAGCCATCAGATCAAACTGAAGATGAAACATCTTATAGAAACTGTTCAATGCTTTCTGTAACAGACCTTAATCAATCAGCAGAGCTTTCAAAAAGAGGAGAGATTTATCAAACTCAAGAACAGGTGGTTAATGCTGACACCTCATGTACTTGTGGAGTTGTTTCTGAAACCTGTATGACACAGGTGAAAGAGGAACTGCATCATGGGGAAGACATAGTTCAAACTGTCTCTCATACATCTGGAACAGAAGTTCCGAGCCAGAGTTGCCTGATTCACGAGGAAACCCAACATCTTCGTACGGATTGTCAAGGAGTCTCTATCAATACGGATTGTACTCCTGCTGCCACAATTGCTGATCAGGAGCTAGAGAAGTCCCAGCCCTCTGTAAGAGAGGCTGGTTATAATGATACGCATAATGGCTTGAATAAAAGTGGGGAACCCCAACCCAAATTTGACCTGGCTGTTAACTCTGCAGAAGAGCGCACTGTTGATTTGAACTCGGTGGCTGACAAGCATCCTCTTGATTTGAGGATAAGAACTGTTGGAGCTAAATTGGACTCTGCAAGCAGTAGATCTGCCATTGCCGAAGATCATGTTTCTCATCCGGAATTTTTGGACTCTAGAGATACACAGCTGGTTTCAGAAGGAAAGGCTATTGATGGTGTTTGCTCAAGTATTACTCAACCACAGTTATCTGGTTTCATGATGCCTGGTGAAAGTGTGAATGTTCAACAAACAAAAACTAATAAGCCAAGACGCGTGCCAATGATTTCTCTTTCTTTGGGTTTGTCTTTACCCATGGAGCTGAGCACCGGAGGCTGTGACTCCACTAATTATTTGTCTCTATTGCCTTTGTCAAATTCGATCACTGATACTAGAGATTTTGTCCAAGATGGATTATATCATTCTTCAACAAACCGGAAACCATTGCTTCCCAGGCACAAGGTAGTTCTTGACAAAATTGTAAACAGAGCAAGAGCTTTAAATGAGAGAGGCAGCTTTCAAGAAAATTTAAAACGGAACCCTTTTATATGGTCTGAAGAGGAGTTGGATTTTCTCTGGATTGGTGTGAGAAGACATGGTAGGGGAAATTGGGTTGCTATGTTAAGGGACCCAAGATTGCGGTTTTCACCATTAAGGGCACCATGGGATCTTGCGGAACGGTGGGAGGATGAACAAATAAAACTTTTGAAAGACACTTGTGTTCCACAACACATGTATCCAAATGTAGAAAGGCCAACAGCGGCATCTTTGCAAGGAAACTTTTGCTTCCGGCATCTGGAATTAGGATCATGGAGACAAAATACAATGGAGGAGACTAAGCTGTCACCTGAAGATGTAATTTCTTATAGGGAGAGCAACCTCTTGAGGCAATCTCTTGCTGGTTTAAATTATCAAAACGACACTGCGTTACACAGTCTTAGGCCAACTATTCATTCCAGGAGGGCCTCTTACAACAATAACATAGAATGGGGATTTTTCAATTCACCCGGAAGCTCGAGTCTTTCCATGGAAAATTCTTATGCAAATGATTATCCCTTTAACTTCTCAACTGCAAAGACTAATTTGCCCCACTGGCTCAGGGAAGCAGTTACTACTCCTCCAATGTCAGTTGAGCCAAATCTGTCTGCAACTGTTTCATTGAGTTCTCATCCACATCCAGAGATGCTGGGTGCTGCAGAGCGTTGCTATCATGCTGATAGGTCATGCTTTCTGCCTCAAATTCGGTTAAGTGGCTCGAGGACGAATGAGCAATTCTCTAGAACATCAAATGGTTCTCCTCACTATTCAACATATTCAAGAAGAAAATATGGGATGATGAAAATGAACAAGCCTCTGCAACAACATCATGTCAGCAAACCAGATGACATGATCATCATCGATAGTGACACGTCTTCTGAAAAGACCATATCTGATGATAACCGTTCGAGTTTGTAG 2856 0.4177 MFGRKVFLTYKRKRQSQSSSFIQGNCCQTSVCEEACDCSLSTPVKHDKLTAEKASEKDEEKPMDTSDGENPCFECAKQPDCSSSFTIQKPDDLRAGERGISDATESIVSKQKSLATRIPCEDNSKKDFGESPPVEKAQNGCDTQRNSHASESSGNEFDNCSNKTIISPPVEMDAGNDLNFINSETPIAREFHSARSDESPALNIPMEDNSPSKDNFRNPSGQIVTQTNLTSPLITFYRRYKRKECMDGTDRKSKLLKKENISVLTKWSKLANANGNFSSCEESSCDECPVDKVPDLNQSVELSERGKPSDQTEDETSYRNCSMLSVTDLNQSAELSKRGEIYQTQEQVVNADTSCTCGVVSETCMTQVKEELHHGEDIVQTVSHTSGTEVPSQSCLIHEETQHLRTDCQGVSINTDCTPAATIADQELEKSQPSVREAGYNDTHNGLNKSGEPQPKFDLAVNSAEERTVDLNSVADKHPLDLRIRTVGAKLDSASSRSAIAEDHVSHPEFLDSRDTQLVSEGKAIDGVCSSITQPQLSGFMMPGESVNVQQTKTNKPRRVPMISLSLGLSLPMELSTGGCDSTNYLSLLPLSNSITDTRDFVQDGLYHSSTNRKPLLPRHKVVLDKIVNRARALNERGSFQENLKRNPFIWSEEELDFLWIGVRRHGRGNWVAMLRDPRLRFSPLRAPWDLAERWEDEQIKLLKDTCVPQHMYPNVERPTAASLQGNFCFRHLELGSWRQNTMEETKLSPEDVISYRESNLLRQSLAGLNYQNDTALHSLRPTIHSRRASYNNNIEWGFFNSPGSSSLSMENSYANDYPFNFSTAKTNLPHWLREAVTTPPMSVEPNLSATVSLSSHPHPEMLGAAERCYHADRSCFLPQIRLSGSRTNEQFSRTSNGSPHYSTYSRRKYGMMKMNKPLQQHHVSKPDDMIIIDSDTSSEKTISDDNRSSL* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3040 951 CDD SANT_TRF 651 695 - -
Lja1g3040 951 PANTHER PROTEIN CHROMATIN REMODELING 4-LIKE 1 950 - -
Lja1g3040 951 MobiDBLite consensus disorder prediction 49 67 - -
Lja1g3040 951 Gene3D - 621 726 - -
Lja1g3040 951 SUPERFAMILY Homeodomain-like 647 697 IPR009057 -
Lja1g3040 951 MobiDBLite consensus disorder prediction 119 164 - -
Lja1g3040 951 MobiDBLite consensus disorder prediction 296 318 - -
Lja1g3040 951 MobiDBLite consensus disorder prediction 49 70 - -
Lja1g3040 951 MobiDBLite consensus disorder prediction 137 164 - -
Lja1g3040 951 MobiDBLite consensus disorder prediction 193 223 - -
Lja1g3040 951 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 1 950 - -
Lja1g3040 951 MobiDBLite consensus disorder prediction 203 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3040 Lja-Chr1 36784603 36791525 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3040 - - lja:Lj1g3v2808080.1 1928.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3040 1 36784603 36791525 Lja1g3040 1 36784603 36791525 ECH