Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3039 ATGGCGCATGATAGCAACCACCACCACCACAACAACCACCGTTCTTCAAGCTCTTCCTCCTCCAGTGACATTTCAGTGTATGTCGACGCTCCCGCTACTTCCATTGCCTCTACTTCAGGGCATGTGGACAGGGATTCATCGGAGAATGTGGCTGAGAAAGAGGCTCCTGCGGCGGGTGTTGTGGCTGTGGCGGAAGAAACTGGACCGTCCAATCAGGGTTTGGTAATTAGGAATGGTGATCGTAAAGTTGGAAAGACCAATGGAATCAATTGGTTGGCCGCGAAGTTGCTTGATGAGAATGTTCCCATGAAGAAAAGGCTGCGATGGCTAAAAAAGGCTTCCTTGGTTAAGGATGATGGTACTGTAGTAATTGATGTTCCAGGGTCGCATTCACCAATTGAAACTGGGGTTATTACTAATGAAGCTCATGATGTATCTTTCAAGAGAAAGCCCAGTCAGGATATTCGGCCTGTTCAGCCGCTTCAAATTGTGATGCTTATAGTTGGAACACGGGGAGATGTTCAGCCTTTTGTTGCCATTGGGAAGCGTCTACAGGTAGACGGTCACAGGGTTAGGCTAGCTACTCATAAAAATTTTGAAGATTTTGTCTTGAATGCAGGCTTGGAGTTTTACCCTTTAGGTGGAGATCCCAAAGTTCTTGCTGGTTATATGGTCAAGAATAAAGGCTTCTTGCCCTCAGGTCCTTCAGAAATACATTTACAAAGAAATCAAATCAAGGCTATTATTAATTCTTTGCTTCCTGCATGCATCAGTCCTTACCCAGATTCCAATGTTCCATTTGAAGCAGATGCAATAATTGCCAATCCTCCAGCATATGGGCATTCTCATGTTGCTGAGTATCTAAGAGTTCCCCTTCACATATTCTTCACAATGCCATGGACGCCTACCGGTGAATTCCCACATCCTCTTTCCCGTGTTAAGCAACCAATTGGATACAGACTGTCATATCAAATAGTTGATTCTTTAGTATGGCTGGGAATGCGAGACCTGATAAATGATTTTAGGAAGAAGAAGTTGAAGTTAAGGCCTATTACTTACCTAAGTGGGTCTTATACTTCTCCTCCTGAGGTTCCCTATGGTTATATATGGAGCCCTCACTTGGTCCCTAAACCAAAAGATTGGGGGCCTAACATTGACGTTGTGGGATTTTGTTTCCTCGATCTTGCTTCAAATTATGAACCCCCAAAATCGCTAGTAGATTGGCTTCAAGAAGGCAAAAAACCTATATATGTTGGATTTGGTAGCCTTCCTCTACAGGCTCCAGAAAAAATGACAAAAATTATTGTTCAAGCTCTGGAACAAACAGGGCAGAGAGGTATCATCAACAAAGGCTGGGGCGGTCTTGGGGATTTGGCAGAAGATAAGAAATTTGTGTACTTATTGGACAACTGTCCGCATGATTGGCTATTTCCAAGATGTACTGCCGTGGTACATCATGGGGGTGCTGGAACAACTGCTGCTGGTCTCAGAGCTGAATGCCCAACAACTGTCGTACCGTTCTTCGGGGACCAGCCATTTTGGGGAGAGCGAGTGCACACCAGAGGGGTAGGTCCTGCACCCATCCCGGTGCAGGAGTTTACACTGGAAAAGTTGGTTGATGCCATACGCTTCATGCTGAATCCAGAGGTGAAAAGGCGTGCTGTTGAACTTGCTAAGGCCATGAAAAACGAAGATGGTGTGGAAGGAGCAGTTAAAGCCTTCTATAAACATTATCCAAGCCAAAAACATGATACAGAGGCGCCTAAGCCATTAGCCTCAGTTCCTAAAGGCTTCTCTATACGAAGATGCTTTGGTTGCTATAACTCTTCTGGATAA 1836 0.4499 MAHDSNHHHHNNHRSSSSSSSSDISVYVDAPATSIASTSGHVDRDSSENVAEKEAPAAGVVAVAEETGPSNQGLVIRNGDRKVGKTNGINWLAAKLLDENVPMKKRLRWLKKASLVKDDGTVVIDVPGSHSPIETGVITNEAHDVSFKRKPSQDIRPVQPLQIVMLIVGTRGDVQPFVAIGKRLQVDGHRVRLATHKNFEDFVLNAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIHLQRNQIKAIINSLLPACISPYPDSNVPFEADAIIANPPAYGHSHVAEYLRVPLHIFFTMPWTPTGEFPHPLSRVKQPIGYRLSYQIVDSLVWLGMRDLINDFRKKKLKLRPITYLSGSYTSPPEVPYGYIWSPHLVPKPKDWGPNIDVVGFCFLDLASNYEPPKSLVDWLQEGKKPIYVGFGSLPLQAPEKMTKIIVQALEQTGQRGIINKGWGGLGDLAEDKKFVYLLDNCPHDWLFPRCTAVVHHGGAGTTAAGLRAECPTTVVPFFGDQPFWGERVHTRGVGPAPIPVQEFTLEKLVDAIRFMLNPEVKRRAVELAKAMKNEDGVEGAVKAFYKHYPSQKHDTEAPKPLASVPKGFSIRRCFGCYNSSG* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3039 611 MobiDBLite consensus disorder prediction 1 56 - -
Lja1g3039 611 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 379 559 IPR002213 GO:0008194
Lja1g3039 611 MobiDBLite consensus disorder prediction 15 44 - -
Lja1g3039 611 CDD GT1_Gtf-like 163 577 IPR002213 GO:0008194
Lja1g3039 611 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 8 606 - -
Lja1g3039 611 Gene3D Glycogen Phosphorylase B; 392 561 - -
Lja1g3039 611 Gene3D Glycogen Phosphorylase B; 163 566 - -
Lja1g3039 611 PANTHER UDP-GLUCOSE:STEROL GLUCOSYLTRANSFERASE SGT4 8 606 - -
Lja1g3039 611 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 163 577 - -
Lja1g3039 611 Pfam Glycosyltransferase family 28 N-terminal domain 163 306 IPR004276 GO:0005975|GO:0016758|GO:0030259
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3039 Lja-Chr1 36775350 36782106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3039 93 606 Glycosyltransferase AT3G07020 70.229 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3039 K05841 - gmx:100779695 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3039 1 36775350 36782106 Lja1g3039 1 36775350 36782106 ECH