Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3033 ATGGCAACCGCGGCGGCGCTCTTTTCCCATCTTCGCCGTGCGCGTTACTCCTCCCTCCTCTACGTGCCTCGTGTCCTCACCTCTCACCACCCTCCCCCTCTTCCCTCTTCCCCCACACCTCAGTCTCCAACCTTCCCCTTCCTCGGCGCGTTCCGCACGCGCGCTTTCTCGACTCGCCCATCCCTCGACGGCGACTCGGAGACGGACTCGGTCGGTCTCGACTCACCGGTTACCTCCGAGCTCCTGAAAGTGATCTCCGACAGCAGCGCCGGCGGCGGCGAAGAAAACCTGGTCTTCCCCGTCCGTGCAGTGATTTCGATACTTGACTCTCTCCACGATCTTTCTGGATTTCCATGGTGGATAACAATAGTTTCATCTACATTGGCTCTCAGAATTGTTCTGCTCTTTCCTTTGGTTGTAACACTTCACAAGGTTAAAAGGATTGGAGAATTTTTCCCCAAATTGCCTCCTCCATTCCCACCACCTTTCTCAGGAAAGAGTTATATTCGCCACTTTCAATTTTTCACGAAGGAGAGAAAAGCAGTTGGATGCCCCTCATTTGTGTGGGTTCTGGTACCACTTATTGTCCAGGTTCCGTGCTTTTTCTTATGGATGATGAGCATCAGGAAGATGTCTCTGAATGATCACCCTGGTTTTGATTGCGGTGGTGCTTTATGGTTCCAGAATTTAACAGAACTCTCTCACGGTTATTCAGGGTTCATCTTTCCTTTTCTGATTGCTGGTTTGCACTACATTAATGTTCAGATATCATTTCGGAAACCTGTGGTCGAAGAAACGAGGGGCATTATTCAGTTATTATCAGAATACTATAAGATGTACTTGGACATTCTAACGGTGCCTATGGCTTTTTTTGCCTTCTGTGTTCCTCAGGGTAGCCAAGTCTATTGGATCACCAATAGTTCGTTATCTCTCGTTCAGCATTTCACTCTTAGACACCCGGCTGTCCATGCAAAATTGGGGTTAGTTGACGAGAATAGTCAAAAAGCTGCTCCTTCTAAGGAAATTGGTACTTCTAAAACGCCCCCTTCATTGGGGTTACAAGAGAATAGTCCAACGGCAGCGGTCAAGGAAACAGTTTCTCCTGAAAATAACCCTCTGGATTCACCTGAAAAGTGGCAGAAAATACCTATAGAGGATATGTCGCCTAACGAACTGACTACCCTTGCAATCCCATTTCTATCCAGCAATGATAAAGAAAGTGCAATTCCTTTACTAAAACTAGCACTTGATAAGGATCCTGAATACGTACGAGCTTTGGTTTTGATGGGACGAGTCCTATTGCTGAAGCTTATAAATGATGAAGCTAAAGAGTACTTTGAGCGTGCAATATCAAAGCTTTCTCTTGACGGCCAACCAGCTGATGCAGAAGAAGTTGATCTTTTGATTCTTTCATCCCAATGGGCTGGAATTGCTTGTGAACGACAGGGAAAGAGGGCTGAAGGACGTGCCCACTTTGAAAGAGTTGCAAATATGGAGGAGCCACAAGATCCAACGAGCAAAGGCTATTATTTTGATGGGTTGTTGTTGCTTGCAAGCACTCTATTTGATTCGGGTGAAAAGGCTGAAGCTGCAAAGTATTTGCGTCTTGTCGTTGCTTATAACCCTCGTTATAAAAATTTCTTGGATCAGTGTGAGCAAGATGATGATATTGCCGATGACCTTGCTCGTAGTAGGAGAGAACCCTGA 1707 0.464 MATAAALFSHLRRARYSSLLYVPRVLTSHHPPPLPSSPTPQSPTFPFLGAFRTRAFSTRPSLDGDSETDSVGLDSPVTSELLKVISDSSAGGGEENLVFPVRAVISILDSLHDLSGFPWWITIVSSTLALRIVLLFPLVVTLHKVKRIGEFFPKLPPPFPPPFSGKSYIRHFQFFTKERKAVGCPSFVWVLVPLIVQVPCFFLWMMSIRKMSLNDHPGFDCGGALWFQNLTELSHGYSGFIFPFLIAGLHYINVQISFRKPVVEETRGIIQLLSEYYKMYLDILTVPMAFFAFCVPQGSQVYWITNSSLSLVQHFTLRHPAVHAKLGLVDENSQKAAPSKEIGTSKTPPSLGLQENSPTAAVKETVSPENNPLDSPEKWQKIPIEDMSPNELTTLAIPFLSSNDKESAIPLLKLALDKDPEYVRALVLMGRVLLLKLINDEAKEYFERAISKLSLDGQPADAEEVDLLILSSQWAGIACERQGKRAEGRAHFERVANMEEPQDPTSKGYYFDGLLLLASTLFDSGEKAEAAKYLRLVVAYNPRYKNFLDQCEQDDDIADDLARSRREP* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3033 568 SUPERFAMILY TPR-like 392 546 IPR011990 GO:0005515
Lja1g3033 568 PANTHER ALBINO3-LIKE PROTEIN 3, MITOCHONDRIAL 9 554 - -
Lja1g3033 568 SMART tpr_5 423 456 IPR019734 GO:0005515
Lja1g3033 568 SMART tpr_5 511 544 IPR019734 GO:0005515
Lja1g3033 568 SMART tpr_5 389 422 IPR019734 GO:0005515
Lja1g3033 568 PANTHER OXA1 9 554 IPR001708 GO:0016021|GO:0032977
Lja1g3033 568 MobiDBLite consensus disorder prediction 337 356 - -
Lja1g3033 568 Pfam Tetratricopeptide repeat 514 543 IPR019734 GO:0005515
Lja1g3033 568 Gene3D Tetratricopeptide repeat domain 372 564 IPR011990 GO:0005515
Lja1g3033 568 MobiDBLite consensus disorder prediction 333 356 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3033 - - gmx:100797573 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3033 1 36704154 36712974 Lja1g3033 1 36704154 36712974 ECH