Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3029 ATGAAAATGGTGTCAATGAGTGTGGGAATGCCCTCAATCTCAAAATGTTTTCTTTTCAACACAGGATTAAGAACACCAACAACTCGTTACTCTGTCAACTGCACCTTGAAACCTTCACTTTCAGCTTCAGTCACAAACATGGCACTCCCCAACACTACCAACAGGAAGCTTCCCATTCTGCTGTTCGACATCATGGACACTCTCGTTCGTGACCCTTTCTACGAGGATGTTCCTGCTTTCTTCGGAATGTCTTTTAAGGAACTCATCGATTGCAAGCACCCAACTGCTTGGCTTGAGTTTGAGAAGGGTTCCATTGATGAGATGGAGCTAGCAAGAATATTTTTTAAGGATGGAAGGGATTTTGATTTAGAAGGCCTTAAAACTTGTATGAGAAATGGATATTCTTACATAGACGGCATTGAACAATTGCTTTTTACCTTAAAGCAAAACAACTTTGAGATGCATGCTTTTACAAACTATCCTACATGGTACCAGTTGATTGAAGACAAGTTAAAGCTATCCACATATTTATCTTGGACATTTTGCTCATGCACACATGGAAAGAGGAAGCCTGATACTGAATTCTATATGGAAGCTCTGAGGCATCTTAAAGTTGATCCAGCATCTTGTATTTTTGTAGATGACAGGTTCCTACTCTTTCTATATACCAGATCATTTATGGAAATTAAACCATGGTTACCATTTATCTGTAATAAATACACATATACATTTGTGTACAATGCATATGTTCTAGCATCTTTTAAATGTTTTCTTGTTTAA 780 0.3769 MKMVSMSVGMPSISKCFLFNTGLRTPTTRYSVNCTLKPSLSASVTNMALPNTTNRKLPILLFDIMDTLVRDPFYEDVPAFFGMSFKELIDCKHPTAWLEFEKGSIDEMELARIFFKDGRDFDLEGLKTCMRNGYSYIDGIEQLLFTLKQNNFEMHAFTNYPTWYQLIEDKLKLSTYLSWTFCSCTHGKRKPDTEFYMEALRHLKVDPASCIFVDDRFLLFLYTRSFMEIKPWLPFICNKYTYTFVYNAYVLASFKCFLV* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3029 259 Pfam Haloacid dehalogenase-like hydrolase 133 216 IPR041492 -
Lja1g3029 259 PANTHER ALPHA-D-GLUCOSE 1-PHOSPHATE PHOSPHATASE 51 217 - -
Lja1g3029 259 Gene3D - 58 218 IPR023214 -
Lja1g3029 259 SUPERFAMILY HAD-like 60 217 IPR036412 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3029 K20860 - gmx:100527586 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3029 1 36672032 36681006 Lja1g3029 1 36672032 36681006 ECH