Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3026 ATGGCGTCGGTGTTTGTGTACCATGTGGTGGGTGATCTGACGGTGGGGAAGCCGGAGCTGGTGGAGTTTCATGAGACTGAGACGGTGGAGAGTGCGATAAGGGCAATAGGGGAATCCCCTGAGGGAAGCATACCTGTATGGAAGAAGCGATCTCATGTGGTGGGGAGTGGTGTGGTTGAGAACAGTGATATGAGGCAGCAGAGATTTGTTGGGATTCTTAGTTCCTTTGACATAGTTGGATTTTTGGCTAAGAGTCAGTGTTTGGAGGATCAGGACAAGGCTTTGAAGACACCAGTTTCTGAGGTTGTTGTTCCAAATAATTCTCTGCTCAGGCTAGTTGACCCTGCAACAAGATTGATAGATGCACTGGACATGATGAAGCAAGGTGTGAAACGTCTGCTTATTCCAAAGAGCGTAGTATGGAAGGGCATGAGTAGGCGGTTCTCAATGATCTACTACGGCAAGTGGCTCAAGAATCCCGAAACTCCTACCAGCAGCAGCAACAATCTACCTTCAAACGTGAATCGGACCTCCTCATCTTCCACCGCAGCTATCCGCGACAAGTTCTGTTGTCTCTCTAGAGAAGATGTACTTCGTTTCATCATCGGTTGTCTCGGAGCTTTAGCCCCACTTCCCCTCACTTCCATTGCTGCTCTTGGAGCCATCAACGCAAACTACAGGTACATTGAAGCTTCCACTCCCGCTATCGAAGCGACTCAAAAGCTTCCTCTAGATCCCAGCGCGGTTGCGGTCGTAGAGAACACGTCAGATGGCCAGTGCAAGATCATTGGTGAAATTTCTGCAATCAAGTTATGGAAATGCGATTACTTAGCCGCAGCGTGGGCTTTAGCGAATCTCTCGGCAGGACAGTTTGTTATGGGAGTTGAAGATAACGTTACCGGAAGCTCGCTGCCCGATTTCTGTGTGAATTCAACAGGTGGAGATAATAACGGTTCAGTTAATGGTAGTGTTTCAAGAAAACCGAGGAAATTCAGCAGCAGGAGTATCGGTTTCTTCAGTAACTCTGCAAGCCCTGGCTTTGGTTCTAGGAGCATGTATAGAGGTAGAAGTGCACCCTTGACATGTAAAATCACTAGTTCACTGGCTGCAGTTATGGCTCAGATGCTATCTCACCGCGCAACTCATGTGTGGGTCACTGAGGACGAGAGTGATGATGTTATAGTTGGTGTGGTGGGGTATGCTGATATTTTTGCTGCTGTGACCAAACCACCTACAACCTTCACTCCTGCAAATAGATCTACAGAGGGGTGTCCAAATGAAATTCAATGTTGA 1293 0.4787 MASVFVYHVVGDLTVGKPELVEFHETETVESAIRAIGESPEGSIPVWKKRSHVVGSGVVENSDMRQQRFVGILSSFDIVGFLAKSQCLEDQDKALKTPVSEVVVPNNSLLRLVDPATRLIDALDMMKQGVKRLLIPKSVVWKGMSRRFSMIYYGKWLKNPETPTSSSNNLPSNVNRTSSSSTAAIRDKFCCLSREDVLRFIIGCLGALAPLPLTSIAALGAINANYRYIEASTPAIEATQKLPLDPSAVAVVENTSDGQCKIIGEISAIKLWKCDYLAAAWALANLSAGQFVMGVEDNVTGSSLPDFCVNSTGGDNNGSVNGSVSRKPRKFSSRSIGFFSNSASPGFGSRSMYRGRSAPLTCKITSSLAAVMAQMLSHRATHVWVTEDESDDVIVGVVGYADIFAAVTKPPTTFTPANRSTEGCPNEIQC* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3026 430 Gene3D - 341 409 IPR046342 -
Lja1g3026 430 SMART cbs_1 19 83 IPR000644 -
Lja1g3026 430 SMART cbs_1 358 408 IPR000644 -
Lja1g3026 430 Gene3D - 5 138 IPR046342 -
Lja1g3026 430 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 1 418 - -
Lja1g3026 430 SUPERFAMILY CBS-domain pair 6 135 IPR046342 -
Lja1g3026 430 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX6 1 418 - -
Lja1g3026 430 CDD CBS_pair_SF 23 135 - -
Lja1g3026 430 SUPERFAMILY CBS-domain pair 358 408 IPR046342 -
Lja1g3026 430 Pfam CBS domain 358 407 IPR000644 -
Lja1g3026 430 ProSiteProfiles CBS domain profile. 352 413 IPR000644 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3026 - - ccaj:109814707 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3026 1 36651373 36654982 Lja1g3026 1 36651373 36654982 ECH