Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3022 ATGGCGCTGCGCTTCAACGATCGCAGAACCACCGCTCTCGCAATTCTCCTCTGCTTCCTCTTCCACCTCTCGCCGACACTCGCTCAGGATTCTCTGGCTCAGATCGGTGGATCTGTGGATCTCGGTCGCCGCGGCAAAGTTATGTTGCATCATAATGCTTCAGTCATTTCTATTGGCTTGGATTCCACTGGTGTTGGACTCTTTGATGCTTTTTTTGCCAGTCTATCAATGATCCTTGTCAGTGAGATTGGGGATGAGACATTTATAATAGCAGCTCTTATGGCTATGCGTCACCCTAAGTCGATTGTGTTGTCTGGTGCACTCAGTGCCCTGATTATAATGACAGTACTTTCTACAGGACTAGGAAGGATTGTGCCAAATTTGATTTCGAAGAAGCATACAAATAGTGCTGCTACAGTTCTTTATGCTTTCTTTGGGTTACGATTGCTGTACATTGCGTGGAGATCATCAGATTCAAAAACTTCACAGAAGAAAGAAATGGAAGAAGTTGAAGAGAAACTTGAAGGTGGACAAGGAAAAACTTCATTTCGACGGTTCTTTTCAAGATTTTGCACACCAATATTTTTGGAGTCTTTTATTTTAACATTCCTTGCTGAGTGGGGTGATCGCAGCCAGATTGCGACAATTGCACTGGCAACCCACAAAAATGCGCTGGGAGTGGCGGTCGGGGCTACTATAGGACACACCATCTGTACTTCTGTGGCAGTGGTGGGGGGAAGCATGCTGGCATCTAAGATTTCCCAGCGCACAGTGGCCACAGTTGGTGGTTTGCTCTTCCTCGGCTTTTCAGTGTCTTCATACTACTACCCTCCTCTATAA 840 0.4607 MALRFNDRRTTALAILLCFLFHLSPTLAQDSLAQIGGSVDLGRRGKVMLHHNASVISIGLDSTGVGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVPNLISKKHTNSAATVLYAFFGLRLLYIAWRSSDSKTSQKKEMEEVEEKLEGGQGKTSFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGATIGHTICTSVAVVGGSMLASKISQRTVATVGGLLFLGFSVSSYYYPPL* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3022 279 PANTHER GDT1-LIKE PROTEIN 3 36 277 - -
Lja1g3022 279 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 36 277 IPR001727 -
Lja1g3022 279 Coils Coil 160 180 - -
Lja1g3022 279 Pfam Uncharacterized protein family UPF0016 197 269 IPR001727 -
Lja1g3022 279 Pfam Uncharacterized protein family UPF0016 73 146 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3022 Lja-Chr1 36594954 36599319 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3022 K23541 - gmx:100785207 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3022 1 36594954 36599319 Lja1g3022 1 36594954 36599319 ECH