Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3019 ATGGCTGCTGCTTCTCCAATGGCTAGTCAGCTCAAGTCCACCTTCACTAGGCCTTCTCTGGTCACACCCAAGGGCCTCTCAGGCTCTTCTCCACTCCACCTATTGCCTTCTAGAAGACAATTCACCTTCACTGTCAAGGCCATTCAATCTGAGAAGCCAACTTACCAAGTGATTCAGCCAATTAATGGTGACCCATTCATTGGAAGCCTTGAAACTCCAGTTACATCAAGCCCCTTGGTTGCATGGTACCTCTCTAACCTTCCAGCATACAGAACTGCTGTGAACCCACTCCTAAGAGGGGTTGAAGTGGGCTTGGCCCACGGGTTCCTGCTTGTGGGCCCATTCGTGAAGGCCGGGCCTCTGAGGAACACCGAATATGCAGGAAGTGCAGGCTCTCTTGCAGCTGCTGGACTTGTGGTGATCCTTAGCCTCTGCCTCACAATCTATGGAATTTCATCCTTCAATGAAGGGGATCCATCCACTGCACCTTCATTGACCTTGACCGGCCGCAAGAAGGTGCCTGATCAGCTCCAAACAGCAGATGGCTGGGCCAAATTCACTGGGGGGTTCTTCTTTGGAGGCATTTCTGGGGTTACTTGGGCTTACTTCCTCCTCTATGTCCTAGATCTTCCATACTACTTCAAGTGA 648 0.5123 MAAASPMASQLKSTFTRPSLVTPKGLSGSSPLHLLPSRRQFTFTVKAIQSEKPTYQVIQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYAGSAGSLAAAGLVVILSLCLTIYGISSFNEGDPSTAPSLTLTGRKKVPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYYFK* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3019 215 Pfam Photosystem I reaction centre subunit XI 57 209 IPR003757 GO:0009522|GO:0009538|GO:0015979
Lja1g3019 215 SUPERFAMILY Photosystem I reaction center subunit XI, PsaL 58 214 IPR036592 GO:0009522|GO:0009538|GO:0015979
Lja1g3019 215 Gene3D Photosystem I PsaL, reaction centre subunit XI 52 215 IPR036592 GO:0009522|GO:0009538|GO:0015979
Lja1g3019 215 PANTHER - 2 215 IPR022980 -
Lja1g3019 215 PANTHER BNAA04G07250D PROTEIN 2 215 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3019 K02699 - gmx:100500317 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3019 1 36569967 36572315 Lja1g3019 1 36569967 36572315 ECH