Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3014 ATGGATGAAGACCAAAAAGAGCCCTTTATCTTCCCCACACCACCCCATTTTCTAGCAAAATTGCTATCCTTCCAAGCAGATGTAATCTACAACCTCATGGCCTCTGTTTTTTCCCCTGTTTCCTCTGTTTTGACCTTGGCATCCGAGTCCTACCACCGTGCTGAGGAGACCAAGGAAAATGTTGAATCAGCAGTGGAAAATGCTCCTTATGGTGGCCTCATCTTGCTGAAGAAGCTGGGGCTTTGTGTTCTGAGTGCTGCATATGTGTGCATGGTTTTGTTTTTGGTTCTGATTCTAGCTGCTATTTTGGGTGTTGGTTTGGTTCGGTTCTGGGTGGAGGAGCCTGTGTTTGTTAAAGAAAGTTTGCATTTTGATTACACTGATGCTCACCCAAAAGCTGTGTTTTTGTTTGATGGTGGAATCAGTGGGGTTGCAGGGGGGTATGTTAAGAAAAAGCAGATACGTGTTCCGGTTGGTCACACATTTTGTGTTTCTTTGGTGCTCTTGATGCCTGAATCTGACTTCAATAGGGAGCTTGGTGTGTTTCAGTTGACAGCAGAACTCCTAGCAGTACATGGAAATGTAACAGCAAAATCCAGCCAGCCATGCATGTTGCGGTTCCGCAGCTCTCCCGTTCGACTAGCCAGGACAGTCATGATGGGTGTGCCTTTGGTTCTAGGAATCTCAGGTGAAACCCAGAAACTCAATGTAGAAATATTAAAGCACAAGGAAGACAGGAGAAGAAGCAATGCTATCAGAGTCACCCTGCACCCAAGAGCAGGAACTTCATCTCTTCCTCAGATATATGAAGCTGAAATCGTGATAAAGTCCAAACTTCCTTGGACTAAAGAGTTTGTCCGCAATTGGAAATGGAGTTTCTATGTTTGGGTGTCCTTGTATGTCTATATTGTGCTACTCATGTTTCTCCTTTGTTACTATAGGCCACTCATCTTTCTGGTCACACCAGAAACTTTTAGTTATCATAGGGTTAGTGAAGTCACAAGTGAAGAAGTAGCTACAGAATCATCACAAATCAGGGAATTTGTGGATGAAAGTGAGGTTTCTGAGTTGTTGAGGAAATGGAGGCGAAGCAGAAGCAAGAGAAAAGCTATCCTTACACATGATGGTGGTGGTGGTGGTGTGGGAGAAACCATTGGCTCATCAGGTTCCAGCATCAGCATGACTACTACTAGAGAAGATGTGACCAGTGTGGCTGTGGAACATGATGTCGAGGATTCTGAATCGGTGTGCATAGATTAG 1260 0.4452 MDEDQKEPFIFPTPPHFLAKLLSFQADVIYNLMASVFSPVSSVLTLASESYHRAEETKENVESAVENAPYGGLILLKKLGLCVLSAAYVCMVLFLVLILAAILGVGLVRFWVEEPVFVKESLHFDYTDAHPKAVFLFDGGISGVAGGYVKKKQIRVPVGHTFCVSLVLLMPESDFNRELGVFQLTAELLAVHGNVTAKSSQPCMLRFRSSPVRLARTVMMGVPLVLGISGETQKLNVEILKHKEDRRRSNAIRVTLHPRAGTSSLPQIYEAEIVIKSKLPWTKEFVRNWKWSFYVWVSLYVYIVLLMFLLCYYRPLIFLVTPETFSYHRVSEVTSEEVATESSQIREFVDESEVSELLRKWRRSRSKRKAILTHDGGGGGVGETIGSSGSSISMTTTREDVTSVAVEHDVEDSESVCID* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3014 419 Pfam Putative adipose-regulatory protein (Seipin) 95 300 IPR009617 GO:0019915
Lja1g3014 419 PANTHER SEIPIN-1 10 418 - -
Lja1g3014 419 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 10 418 IPR009617 GO:0019915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3014 Lja-Chr1 36525215 36527679 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3014 K19365 - gmx:100788783 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3014 1 36525215 36527679 Lja1g3014 1 36525215 36527679 ECH