Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3013 ATGGCCCTGGTTACCACTGCTGAGGTGTGTGATGCAAATCCACAACTAATTTTGAGCGGGGAGGTTCGTGCCCTTCACCCAGTTTTTCAGATCTATGGTCGGAGACAGGTTTTCTCTGGCCCTGTAGTTACCTTGAAGGTATTTGAGGACAATGTTTTGGTCCGCGAGTTCCTTGAAGAGAAAGGCAATGGAAGAGTGCTTGTGGTGGATGGGGGAGGGAGTTTGCGCTGTGCAATATTGGGCGGAAACCCTGTGGTGCAAGCACAGAACAATGGATGGGCAGGTATTGTTGTGAATGGATGTATAAGAGATGTGGATGAGATCAATGGTTGTGATATTGGGGTGAGAGCTCTAGCTTCACACCCCATGAAAGCCAATAAGAAAGGCATGGGAGAAAAGCATGTTCCCATAACTATTGCTGGGACTAGGATCTCTGATGGGGAATGGCTTTATGCTGACACAGATGGAATTCTGATATCTCGAACCGAGCTTTCTGTTTAA 501 0.4731 MALVTTAEVCDANPQLILSGEVRALHPVFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGMGEKHVPITIAGTRISDGEWLYADTDGILISRTELSV* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3013 166 Pfam Aldolase/RraA 6 158 IPR005493 -
Lja1g3013 166 SUPERFAMILY RraA-like 4 164 IPR036704 -
Lja1g3013 166 Gene3D - 3 166 - -
Lja1g3013 166 PANTHER 4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 3-RELATED 4 166 - -
Lja1g3013 166 TIGRFAM NOT-MenG: RraA family 6 160 IPR010203 GO:0008428|GO:0051252
Lja1g3013 166 PANTHER 4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 4 166 - -
Lja1g3013 166 CDD RraA_family 7 160 IPR005493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3013 Lja-Chr1 36520251 36522295 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3013 - - qsu:112030342 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3013 1 36520251 36522295 Lja1g3013 1 36520251 36522295 ECH