Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3012 ATGGCGAAGGCCTTGATCGGCGTGACGCTGAGCCAGCAAGTGTTGTTTAAAAGGAGCAATTCCATTCTCTCTTCTTCTTCATCTTTCAGATCTCGTTCTCTTCCTTCGCTTTTCTTCTCTCCGGTGAAGAACCACAACCACAACCCTCTCGTCGCGTCTCTCTCTTCCCACACCGCCATGGGTCAAACTCCCACCGCCGCTGATGCCGGCATGGACGCCGTCCAGCGCCGCCTCATGTTCGACGACGAATGCATTTTAGTGGATGAGAATGACCGTGTGGTTGGTCATGACAGCAAATACAATTGTCACTTGATGGAAAAGATTGAATCTGAAAATTTGCTGCATAGAGCTTTCAGTGTATTCCTGTTCAACTCAAAGTATGAGTTACTTCTTCAGCAACGATCTGCAACAAAGGTGACATTTCCTCTTGTGTGGACAAACACCTGCTGCAGCCATCCACTGCACCGTGAATCTGAGCTTATTGAGGAGAATTCCCTTGGAGTAAGAAATGCAGCTCAGAGGAAGCTTTTTGATGAGCTTGGCATTCCTGCTGAAGATGTACCAGTTGATCAGTTCACCCCATTGGGCCGCATACTTTACAAGGCACCTTCTGATGGCAAATGGGGAGAGCATGAACTGGATTATCTGCTGTTTATTGTGCGGGATGTTAACGTTCATCCAAACCCTGATGAAGTGGCTGATATCAAGTATGTGAACCGTGAAGAGTTGAAGGAGCTGTTGAGGAAAGCTGATGCAGGTGAGGGAGGTTTGAAGCTGTCCCCTTGGTTCAGACTAGTTGTGGACAATTTCTTGTTCAAATGGTGGGATCATGTTGAGCGAGGGACTCTGGGGGAGGTTATTGACATGAAGACAATTCACAAGTTGACATAA 891 0.4736 MAKALIGVTLSQQVLFKRSNSILSSSSSFRSRSLPSLFFSPVKNHNHNPLVASLSSHTAMGQTPTAADAGMDAVQRRLMFDDECILVDENDRVVGHDSKYNCHLMEKIESENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLHRESELIEENSLGVRNAAQRKLFDELGIPAEDVPVDQFTPLGRILYKAPSDGKWGEHELDYLLFIVRDVNVHPNPDEVADIKYVNREELKELLRKADAGEGGLKLSPWFRLVVDNFLFKWWDHVERGTLGEVIDMKTIHKLT* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3012 296 ProSiteProfiles Nudix hydrolase domain profile. 113 265 IPR000086 -
Lja1g3012 296 CDD IPP_Isomerase 81 268 IPR011876 GO:0004452|GO:0008299
Lja1g3012 296 Pfam NUDIX domain 114 252 IPR000086 -
Lja1g3012 296 SUPERFAMILY Nudix 83 277 IPR015797 -
Lja1g3012 296 PANTHER ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE 50 295 - -
Lja1g3012 296 PANTHER ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE I-LIKE 50 295 - -
Lja1g3012 296 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 43 295 - -
Lja1g3012 296 TIGRFAM IPP_isom_1: isopentenyl-diphosphate delta-isomerase 84 266 IPR011876 GO:0004452|GO:0008299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3012 K01823 - gmx:100789313 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3012 1 36511835 36515467 Lja1g3012 1 36511835 36515467 ECH