Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3001 ATGGCGGGTGGTAGGGTTTCCATTTTGTCATGGATTCTCTTTCTCGCTATCGCCACCGTGCCGTTGACGTCTTCGGCGGCCAATTCAACGACGATATACGAGGAGCTCAAAGCGCAGGGGCTACCGGTGGGGCTTCTTCCGAAGGGGATAACGAAGTATGAAATTAACGGAACCAGTGGTGAGTTCGTGGTGTGGATGGAGGAAGCGTGCAACGCCAAGTTTGAGAACGAGGTGCACTACGATTCCAACATCAAGGGCACCCTCGGTTTCGGATGGATCAAGGGGTTGACCGGTATGACTGCTCAGGATCTCTTCCTGTGGTTTCCTGTGAAGGGGATTCGAGTTGATGTGCCGAGTTCTGGGATCATACACTTCGATGTTGGTGTCGCTGATAAGCAATTCTCTTTGTCCCTCTTTGAAGATCCTCCTGATTGCAACCCCCAGGCTAATGTTGATGGTGATGGTGATGATGATGTGTTGAGGGCTGCTTGGTAG 495 0.5172 MAGGRVSILSWILFLAIATVPLTSSAANSTTIYEELKAQGLPVGLLPKGITKYEINGTSGEFVVWMEEACNAKFENEVHYDSNIKGTLGFGWIKGLTGMTAQDLFLWFPVKGIRVDVPSSGIIHFDVGVADKQFSLSLFEDPPDCNPQANVDGDGDDDVLRAAW* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3001 164 PANTHER PROTEIN, PUTATIVE-RELATED 10 150 - -
Lja1g3001 164 PANTHER T31J12.3 PROTEIN-RELATED 10 150 IPR007493 -
Lja1g3001 164 SUPERFAMILY At5g01610-like 7 147 IPR036758 -
Lja1g3001 164 Pfam Protein of unknown function, DUF538 32 140 IPR007493 -
Lja1g3001 164 Gene3D - 18 149 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3001 Lja-Chr1 36401444 36403479 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3001 - - gmx:100778787 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3001 1 36401444 36403479 Lja1g3001 1 36401444 36403479 ECH