Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2998 ATGGCTTTGTCTATGAAGGCTACACCCCTAACTGGTTCGTGTTTCGTTTCAAATTCAATACGACCTTCCACACATCCACCCTTCAAATCATCGTTTCTTCATTATGGCGGAAGAGCACTGGAAGTTCCTGGTATACGAGTATCATACTCCAATAGGTTGAAATGTCAATGTCATGGTGGCGGTGGGCTTGGTGCTCATATGAACATTTTTAGCAGATTTGCTAGAGTTATCAAGTCATATGCTAATGCCATTATAAGCTCCTTTGAAGACCCTGAGAAGATTTTAGAACAAGCTGTTTTGGATATGAATAATGATTTGGTGAAGGTTCGCCAAGCTACAGCACAGGTTCTAGCATCTCAAAAGCAACTAGAAAGCAAGTACACAGCCATACAAAAAGCTTCAGATGACTGGTATCGAAGGGCACAACTTGCTCTGCAGAAGGGGGATGAGAATCTTGCACGAGAAGCACTTAAGCGAAGAAAGTCTTATGCTGATAATGCAACTGCTTTGAAGATGCAGCTTGAACAGCAAAGGAATGTTGCCAATAGTCTTGTGTCCAAAACACAGCTTCTGGAGAGCAAGATACAGGAGGCAAAGTCGAAGAAAGATACACTCAAAGCAAGAGCTCAATCCGCAAAGACTTCAACCATTGTAAGTGAGATGGTGAGCAATATCAGCACAAGCAGCGCCCTTGCAGCGTTCGATAAGATGGAGGAAAAGGTATTAACTATGGAGGCTCAGGCAGATGCATTGAATCAGTTGTCTACTGACAATCTTGAGGGAAAGTTTGCACTGCTAGAGAACTCTTCTGTTGATGATGATCTTGAAGAGTTAAAGAAAGAAATATATGGAAGCTCTAAGAGGGGAGAACTTCCACCTGGAAGAACTGTTCCCACTAACAAAGAATTTCTATTTCCTGACTTGGAGGTTGAGAAGGAGCTTGATGAATTGAGAAGAAGAGCAAAAGGGTTCTAG 975 0.4236 MALSMKATPLTGSCFVSNSIRPSTHPPFKSSFLHYGGRALEVPGIRVSYSNRLKCQCHGGGGLGAHMNIFSRFARVIKSYANAIISSFEDPEKILEQAVLDMNNDLVKVRQATAQVLASQKQLESKYTAIQKASDDWYRRAQLALQKGDENLAREALKRRKSYADNATALKMQLEQQRNVANSLVSKTQLLESKIQEAKSKKDTLKARAQSAKTSTIVSEMVSNISTSSALAAFDKMEEKVLTMEAQADALNQLSTDNLEGKFALLENSSVDDDLEELKKEIYGSSKRGELPPGRTVPTNKEFLFPDLEVEKELDELRRRAKGF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2998 324 Coils Coil 188 215 - -
Lja1g2998 324 Coils Coil 234 254 - -
Lja1g2998 324 Pfam PspA/IM30 family 68 281 IPR007157 -
Lja1g2998 324 PANTHER PHAGE SHOCK PROTEIN A, PSPA 10 323 - -
Lja1g2998 324 PANTHER MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC 10 323 IPR007157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2998 Lja-Chr1 36383063 36388296 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2998 K03969 - gmx:100794403 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2998 1 36383063 36388296 Lja1g2998 1 36383063 36388296 ECH