Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2996 ATGGACGCGATACGGAAGCAGCTTGATGTGTTGATGGGAGCGAACCGAAACGGCGACGTTCGTGAAGTGAACCGCAAGTACTACGATCGCGATGTCTGTCGCCTCTATCTCGTTGGTCTCTGCCCTCACGAGCTCTTTCAGCTCACGAAAATGGATATGGGTCCTTGCCCTAAGGTGCACTCCTTGCAGCTCAGGAAAGAATATGAGGAAGCGAAAGCAAAAGGTGCCGACAATTATGATAGGGAGTTGGAGGACGTCATAGATAAGCTTATTAGTGAGTGTGATAGGAAAATTGGCAGAGCGCTCAAGCGTCTTGAGGATGATGACGCCAAAGCTGCAATTGCAATTTCTGTTTCTGAAGTAACTCAGACACCTGAGGTGCTCGAGTTGTCCAAACTAATCAAAGAGAAGTTGAAAGAGGCTGATCTACATGATCTTGAAGGCATGACAGATTCGAAGATCCGAGCACTGGAGGTTGTAGAGGAGCTTAGAACTAAAAGAGCAGACAAGCAGTCTGTACTACTTTTAGACGCATTTAACAAAGATAGGGCATCTTTACCTCAACCTCTGCCTAATCCGCCACCTTTGGCGCCTCTTCCTGCCGCTGCTCCTGATCCTCAGACACAGGAGATGATAAATGAGAAGATGAGAAAGGCTGAGGAACTTGGCGAGCAAGGATTGGTTGATGAGGCAAAAAAAGCAATGGAAGAGGCTGAAGCCCTTAAGAAGCTTCCTCCCAGGCAGGAGCCAGTATTGGATTCTTCAAAGTATACAGCTGCCGATGTGCGGATTACTGATCAGAAGCTACGTGTGTGCGACATTTGTGGAGCATTTTTGAGTGTTTATGACAGTGATCGCCGTTTAGCTGATCATTTTGGAGGGAAACTTCATTTAGGGTATATGCAAATTCGTGAGAAGTTAGAAGAACTTCAAGAAGAAAGGAATAAGAGCCGCAAGTTGGATCGGCATGAGGACAGGAGATCAAAAGAACGGAGTCGGGATCGTGATAGGGAGCCGAGTAGGGACCGTGAACGTGGTGAGAGTCATGAACGGGGGCGAGACATCGATCGTAGGAGCAGGGACCGAGATAGGCACCATGATAGAGACCGTGGATATGACCGGGACCGTAATGGAGACCGCAACCGCTCCTATGATTCAAGAAGTCACCGGAGGTCCCGCTCACGGTCTCGGGATCGTCCTCGAGACTATGATCGTCACAGGCGTCATGATCGGTACTAG 1239 0.4883 MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGADNYDRELEDVIDKLISECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLELSKLIKEKLKEADLHDLEGMTDSKIRALEVVEELRTKRADKQSVLLLDAFNKDRASLPQPLPNPPPLAPLPAAAPDPQTQEMINEKMRKAEELGEQGLVDEAKKAMEEAEALKKLPPRQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLEELQEERNKSRKLDRHEDRRSKERSRDRDREPSRDRERGESHERGRDIDRRSRDRDRHHDRDRGYDRDRNGDRNRSYDSRSHRRSRSRSRDRPRDYDRHRRHDRY* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2996 412 MobiDBLite consensus disorder prediction 187 202 - -
Lja1g2996 412 MobiDBLite consensus disorder prediction 312 412 - -
Lja1g2996 412 Coils Coil 224 244 - -
Lja1g2996 412 Coils Coil 300 323 - -
Lja1g2996 412 MobiDBLite consensus disorder prediction 397 412 - -
Lja1g2996 412 MobiDBLite consensus disorder prediction 184 205 - -
Lja1g2996 412 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 408 IPR004882 GO:0003729|GO:0005685|GO:0006376
Lja1g2996 412 MobiDBLite consensus disorder prediction 312 386 - -
Lja1g2996 412 Pfam LUC7 N_terminus 207 326 IPR004882 GO:0003729|GO:0005685|GO:0006376
Lja1g2996 412 Pfam LUC7 N_terminus 2 171 IPR004882 GO:0003729|GO:0005685|GO:0006376
Lja1g2996 412 PANTHER BNAC02G44170D PROTEIN 1 408 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2996 - - gmx:100793888 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2996 1 36373891 36380289 Lja1g2996 1 36373891 36380289 ECH