Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2992 ATGGCGGCGAAGAGGGTGGGTTTGCCTCTGATGAAGTACTTGAGAGTGAACGTGGTCGGTGCTCTGCCGCACCAGTACCAATCTCCGTTCTCCTCCACCTCCGTCTTCCTTCGCCGCTTCAGCGAAGAGGTTAGGGGTTCCTTCCTCGACAAATCCGAGGTCACAGATCGCGTCGTCTCCTGCGTCAAAAACTTCCAGAAAGTTGACCCATCCAAGGTTACCCCCAATGCTCATTTCCAGAATGACCTTGGATTGGATAGTTTAGATTCTGTAGAGATCGTGATGGCTCTTGAGGAAGAATTTGGATTTGAGATTCCTGATAATGAAGCGGACAAGATCAACTCCATTAAACTTGCAGTTGACTTCATTGCATCTCACCCTCAGGCAAAGTAG 393 0.4936 MAAKRVGLPLMKYLRVNVVGALPHQYQSPFSSTSVFLRRFSEEVRGSFLDKSEVTDRVVSCVKNFQKVDPSKVTPNAHFQNDLGLDSLDSVEIVMALEEEFGFEIPDNEADKINSIKLAVDFIASHPQAK* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2992 130 PANTHER ACYL CARRIER PROTEIN 2, MITOCHONDRIAL 1 130 - -
Lja1g2992 130 SUPERFAMILY ACP-like 50 126 IPR036736 -
Lja1g2992 130 Hamap Acyl carrier protein [acpP]. 53 127 IPR003231 GO:0006633
Lja1g2992 130 ProSiteProfiles Carrier protein (CP) domain profile. 52 127 IPR009081 -
Lja1g2992 130 ProSitePatterns Phosphopantetheine attachment site. 82 97 IPR006162 -
Lja1g2992 130 PANTHER ACYL CARRIER PROTEIN 1 130 IPR003231 GO:0006633
Lja1g2992 130 Pfam Phosphopantetheine attachment site 56 122 IPR009081 -
Lja1g2992 130 Gene3D - 41 129 IPR036736 -
Lja1g2992 130 TIGRFAM acyl_carrier: acyl carrier protein 52 126 IPR003231 GO:0006633
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2992 Lja-Chr1 36347698 36349739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2992 1 130 Acyl Lipid Metabolism Gene Families AT1G65290 75.758 5.60e-64 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2992 K03955 - gmx:100499669 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2992 1 36347698 36349739 Lja1g2992 1 36347698 36349739 ECH