Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2989 ATGCGGTTGTGTCCCTGTTTTGGCGACGGAAACACCGAGCAAGCAGCGGTGGCGGATCGCGACCCGGTCCTACTAGTCTCCGGCATGGGTGGCTCCATCCTCAACTCCAAACCCAAGGGATTCGGTGTCACCACTCGTGTCTGGGTCAGGCTCCTCCTCGCTGACCTCGAGTTTCGCAAGAAGATTTGGTCCATCTACAATCCCAAAACAGGTTACACGGAATCGTTAGACAAGAAATCTGATATTGTGGTTCCTCAAGATGATCATGGCCTCTATGCAATTGATATTTTAGATCCTTCATGGTTTACGAAATGCGTACATTTGACGGAGGTGTATCATTTTCATGACATGATTGACATGCTTGTTGAATGTGGGCATAAGAAAGGAACCACCTTGTTTGGATATGGATATGATTTCAGGCAAAGCAATAGGATTGACAAGTTATTGGATGGTCTTAAACACAAGTTGGAAACTGCTTACAAGGCCTCTGGTGGAAGAAAAGTCAATATAATCTCACACTCGATGGGAGGAGTTTTGATCTTGTCTTTCATGACACTTCATAAAGATCTGTTTTCAAAATATGTGAATAAGTGGATTGCCTTGGCTTGCCCTTTCCAAGGAGCCCCGGGGTGCGTCAATGATTGTTTATTAACTGGACTAGAGTTTGTTGAAGGCTTTGAAAGCTATTTTTTTGTATCAAGGTGGAGTTTTCATCAATTGCTAGTTGAGTGTCCATCAATCTATGAGATGTTGCCAAATCCCAAATATGAATGGAAAAAGCAGCCAGAAATTCTAGTTTGGCGCAAGCTTACAAAGGATGGGGATATTAGCGCAACTCTGGAATCTTATGGACCAGTCGAGAGTATCTCTTTATTTGAAGAAGCATTGAGGCACAATGAGCTAAATTATAACGGAAAGCTGATATCACTGCCCTTTAACACTGCTATCTTCAAATGGGCTAGTGGAACTCGTGAAGTTTTATGTAATGCAAAACTGCCAGATGGGGTCAGCTTCTATAACATTTATGGGACATCATTTGACACGCCTTTTGATGTTTGCTATGGTTCGGAAAAATCTCCAATAGAAGACTTATCTGAAGTATGCCAAACATTGCCACAATATTCTTATGTTGACGGAGATGGAACAGTTCCCTCGGAATCGGCCAAGGCGGATGGACTTGAAGCCATTGAAAGGGTGGGAGTTGCTGCCGAGCACCGTGCACTATTACGAGATAAAACCGTATTTCAGCTTATTCAAAAATGGTTGGGTGTTGAGCCAGTGGTTAGCAAGCAATCTAAGACATCAAAAGTGGTAGATATTGCTGCAATCAAGCCTATGATTCTATAA 1347 0.4291 MRLCPCFGDGNTEQAAVADRDPVLLVSGMGGSILNSKPKGFGVTTRVWVRLLLADLEFRKKIWSIYNPKTGYTESLDKKSDIVVPQDDHGLYAIDILDPSWFTKCVHLTEVYHFHDMIDMLVECGHKKGTTLFGYGYDFRQSNRIDKLLDGLKHKLETAYKASGGRKVNIISHSMGGVLILSFMTLHKDLFSKYVNKWIALACPFQGAPGCVNDCLLTGLEFVEGFESYFFVSRWSFHQLLVECPSIYEMLPNPKYEWKKQPEILVWRKLTKDGDISATLESYGPVESISLFEEALRHNELNYNGKLISLPFNTAIFKWASGTREVLCNAKLPDGVSFYNIYGTSFDTPFDVCYGSEKSPIEDLSEVCQTLPQYSYVDGDGTVPSESAKADGLEAIERVGVAAEHRALLRDKTVFQLIQKWLGVEPVVSKQSKTSKVVDIAAIKPMIL* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2989 448 Pfam Lecithin:cholesterol acyltransferase 65 388 IPR003386 GO:0006629|GO:0008374
Lja1g2989 448 Gene3D alpha/beta hydrolase 78 423 IPR029058 -
Lja1g2989 448 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 4 441 - -
Lja1g2989 448 SUPERFAMILY alpha/beta-Hydrolases 19 390 IPR029058 -
Lja1g2989 448 PANTHER PHOSPHOLIPASE A(1) LCAT3 4 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2989 Lja-Chr1 36311175 36327038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2989 4 439 Acyl Lipid Metabolism Gene Families AT3G03310 68.409 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2989 K22389 - gmx:100797043 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2989 1 36311175 36327038 Lja1g2989 1 36311175 36327038 ECH