Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2752 ATGCTCCTCAAATATCTGAGTTGCTGGCATTCAAAGCACACAAATTCATCATCTGAGAAACACTACCCAACAATAATTGAAGAGTTATGTCATCTCTTTTCTCTGGACGAACTTAGGAAATCAGCCAACAACTTCAATGAAAATCGAATAATTGGGACATCATTCTTTAACATAGTATATAGAGGTTCTGTCAAACATAATGGTGCAGCTGATTATCCAGTGACATTGAAGCGGTTGAAAAGTATGTCAGACCAATGGAAGTTCAGGAAGGAAATTGAGATAAACTGCCAGCTTCATCACCCTAATTTGGTCTCTTTTATAGGCTTTTGTGACCACAAAGATGAAAAAAATCTTGTGCATGAGTACATGTCTAATGGGTCTCTTTATGACCAGTTGCGTTATAGTGATCCGGAAAATTCACTCTCTTGGAAGAAAAGGCTGGAAATATGCATTGGAGCTGCAAAAGGACTACACTACCTGCATACTGGAGCCAGAAGATCCATCTTTCACTGTGACATAAAGCCCCAAAACATTCTTTTAGAAAACAACATGGTTCCTAAACTCTCACATCTTGGGTTTTCCTTACAAAGATCGCATTTTAAGTCCAAGCCAAAACCTATTAAAGCCGACAACATTATTGGTACACCTGATTACATGGCTCCTGAGTACATCCAAACAAATACCTTCACAGATAAGTGTGATGTTTATTCCTTTGGTATGGTTCTCCTTGAAGTAGCATGCACGAATCACGAGCAGACAGCTGGCAAGATTATTGATCCCATTCTCATGAGACAAATCGCACCAGAAAGTTTGGCAGTATTCATGGATGTCACCAAAAGATGCTTGAAGATGGAACCGAATGATAGACCAATAATGGGTGAAGTTGAGGTTGAACTTGAGAAAGCTCTGGCACTGCAGGAGGAAAAAACACTCACTAGGAGAACCTCACCAAGGGAAACACTAATATTTTCCTCACTGGATTTTTTCTCTCTAATAGCAATTCAAGTTGAATTGCTTATTGTGGTGTATATTCTCTCTAACAATTCAGCTATAGGATGA 1059 0.3909 MLLKYLSCWHSKHTNSSSEKHYPTIIEELCHLFSLDELRKSANNFNENRIIGTSFFNIVYRGSVKHNGAADYPVTLKRLKSMSDQWKFRKEIEINCQLHHPNLVSFIGFCDHKDEKNLVHEYMSNGSLYDQLRYSDPENSLSWKKRLEICIGAAKGLHYLHTGARRSIFHCDIKPQNILLENNMVPKLSHLGFSLQRSHFKSKPKPIKADNIIGTPDYMAPEYIQTNTFTDKCDVYSFGMVLLEVACTNHEQTAGKIIDPILMRQIAPESLAVFMDVTKRCLKMEPNDRPIMGEVEVELEKALALQEEKTLTRRTSPRETLIFSSLDFFSLIAIQVELLIVVYILSNNSAIG* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2752 352 Pfam Protein tyrosine and serine/threonine kinase 48 297 IPR001245 GO:0004672|GO:0006468
Lja1g2752 352 SMART serkin_6 45 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2752 352 PANTHER OS07G0166700 PROTEIN 16 316 IPR045272 GO:0004714|GO:0006468
Lja1g2752 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Lja1g2752 352 PANTHER TYROSINE KINASE FAMILY PROTEIN 16 316 - -
Lja1g2752 352 ProSiteProfiles Protein kinase domain profile. 45 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2752 352 Gene3D Transferase(Phosphotransferase) domain 1 123 322 - -
Lja1g2752 352 Gene3D Phosphorylase Kinase; domain 1 6 122 - -
Lja1g2752 352 SUPERFAMILY Protein kinase-like (PK-like) 20 303 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2752 Lja-Chr1 32849372 32851103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2752 8 307 Receptor kinase-like Gene Family AT5G39000 39.939 1.58e-60 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja1g2752 PK_Tyr_Ser-Thr 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2752 - - ahf:112797906 401.749