Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2493 ATGATTTCAAATTCTGAACGTGAGATGGTTTTAATCTTTGGTCTCCTAGGTAACATTGTGTCCTTCATGGTGTTCTTAGCACCCTTGCCAACCTTCTATACAATTTACAAGAAAAAATCATCTGAAGGGTTCCAGTCAATCCCATATGTGGTTGCACTTCTAAGTGCAATGTTGCTGCTATATTATGGTTTCCTCAAGACCAATGCACTCTTGATTATCACCATCAACTGTATTGGATGTGCTATAGAAGTTTCATACCTAATGATGTACATTATATATGCTCCCAAGAAGCAGAAGATATCCACCTTGTTATTGATACTAATGGCAGACATAGGAGGTCTTGGCTTGACCATGATAATCACCATGTTTGTTGTGAAGAGTGCTGAGCGTGTTCATGCTGTTGGATTGATTTGCGCCATTTTTAACATTGCGGTCTTTGCTGCTCCCTTAAGCATCATGAGAAAAGTCATCAAAACCAGAAGTGTAGAGTACATGCCATTTTCCTTGTCCTTGTTTCTTACCCTCTGCGCCACCATGTGGTTTTTCTATGGGCTCTTTGACAAGGATAACTACATCATGATGCCAAATGTGCTAGGATTTTTGTTTGGCATCTCCCAGATGATCTTATACATCATATACAAGAATGCTAAGAAGAAAGTAGAAGTTGAGGCTACAGAGCAACAAGAATGGGGGAATACAGAGAAACCTGCACAGCATAGCAATGATGGGAATAATAAACTTGTTCTCCCTTCAGTGGTGGAAATGAAAGAGAACATAGTTTGA 783 0.3959 MISNSEREMVLIFGLLGNIVSFMVFLAPLPTFYTIYKKKSSEGFQSIPYVVALLSAMLLLYYGFLKTNALLIITINCIGCAIEVSYLMMYIIYAPKKQKISTLLLILMADIGGLGLTMIITMFVVKSAERVHAVGLICAIFNIAVFAAPLSIMRKVIKTRSVEYMPFSLSLFLTLCATMWFFYGLFDKDNYIMMPNVLGFLFGISQMILYIIYKNAKKKVEVEATEQQEWGNTEKPAQHSNDGNNKLVLPSVVEMKENIV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2493 260 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET9 7 235 - -
Lja1g2493 260 PANTHER RAG1-ACTIVATING PROTEIN 1 7 235 - -
Lja1g2493 260 Gene3D - 128 228 - -
Lja1g2493 260 Pfam Sugar efflux transporter for intercellular exchange 12 97 IPR004316 GO:0016021
Lja1g2493 260 Pfam Sugar efflux transporter for intercellular exchange 133 218 IPR004316 GO:0016021
Lja1g2493 260 Gene3D - 10 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2493 Lja-Chr1 28845014 28847187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2493 7 234 Miscellaneous Gene Families AT2G39060 61.842 1.73e-89 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2493 K15382 - gmx:100306393 410.994